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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:CKA1  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT5G67380CKA1GSP:13 PPI:147CKA1 (CASEIN KINASE ALPHA 1); kinase.
Related organ
carpel      urea fraction,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      triton fraction,Schagger 1-DE      Related article
flower      SDS fraction,1-DE      Related article
flower      soluble fraction,1-DE      Related article
flower bud      SDS fraction,1-DE      Related article
juvenile leaf      SDS fraction,1-DE      Related article
seed      detergent fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
Representative Gene Model Description
AT5G67380.1:CASEIN KINASE ALPHA 1 (CKA1); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, core (InterPro:IPR000719), Serine/threonine protein kinase (InterPro:IPR002290), Tyrosine protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-related (InterPro:IPR017442), Serine/threonine protein kinase, active site (InterPro:IPR008271), Protein kinase-like (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: CKA2 (CASEIN KINASE II, ALPHA CHAIN 2); kinase (TAIR:AT3G50000.1); Has 64177 Blast hits to 63506 proteins in 1565 species: Archae - 27; Bacteria - 5348; Metazoa - 28150; Fungi - 7476; Plants - 8680; Viruses - 264; Other Eukaryotes - 14232 (source: NCBI BLink).

AT5G67380.2:CASEIN KINASE ALPHA 1 (CKA1); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, core (InterPro:IPR000719), Serine/threonine protein kinase (InterPro:IPR002290), Serine/threonine protein kinase-related (InterPro:IPR017442), Serine/threonine protein kinase, active site (InterPro:IPR008271), Protein kinase-like (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: CKA2 (CASEIN KINASE II, ALPHA CHAIN 2); kinase (TAIR:AT3G50000.1); Has 55009 Blast hits to 54436 proteins in 1427 species: Archae - 23; Bacteria - 3855; Metazoa - 24461; Fungi - 6999; Plants - 6579; Viruses - 213; Other Eukaryotes - 12879 (source: NCBI BLink).

Predicted Mutant Phenotypes
stem internode    PO:0020142;    
Database cross-references
TAIR Gene: AT5G67380;
IPI: IPI00657434; IPI00523182;
UniParc: UPI00005DC19E; UPI000019717E;
REFSEQ_PROVISIONAL: NP_201539.2; NP_001032165.1;
KEGG: AT5G67380;

GSPannotationmethodsrelated
AT2G46830(CCA1)CCA1 (CIRCADIAN CLOCK ASSOCIATED 1); DNA binding / transcription activator/ transcription factor/ transcription repressortext mining 9724822(in vitro reconstitution assay with recombinant protein|in vitro assay)
AT1G01060(LHY)LHY (LATE ELONGATED HYPOCOTYL); DNA binding / transcription factortext mining 10535927(in vitro assay)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G26410hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G05000tyrosine specific protein phosphatase family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT2G46830(CCA1)CCA1 (CIRCADIAN CLOCK ASSOCIATED 1); DNA binding / transcription activator/ transcription factor/ transcription repressortext mining 9724822(Reconstituted Complex)
AT5G03240(UBQ3)UBQ3 (POLYUBIQUITIN 3); protein bindingtext mining 23667124(Affinity Capture-MS)
AT1G34470permease-relatedtext mining 24833385(PCA)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)
AT1G01060(LHY)LHY (LATE ELONGATED HYPOCOTYL); DNA binding / transcription factortext mining 10535927(Biochemical Activity)
AT2G46830(CCA1)CCA1 (CIRCADIAN CLOCK ASSOCIATED 1); DNA binding / transcription activator/ transcription factor/ transcription repressortext mining 9724822(Biochemical Activity)
AT1G05000tyrosine specific protein phosphatase family proteintext mining 21952135(yeast-2-hybrid)
AT4G26410hypothetical proteintext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT4G01370No related data.
AT4G14365zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein
AT3G63330protein kinase family protein
AT3G05840No related data.
AT3G50000No related data.
AT1G02680No related data.
AT1G07370No related data.
AT1G08880No related data.
AT1G09200histone H3
AT1G10490hypothetical protein
AT1G12920No related data.
AT1G13060No related data.
AT1G16970No related data.
AT1G17790DNA-binding bromodomain-containing protein
AT1G18750No related data.
AT1G24190No related data.
AT1G30400No related data.
AT1G30825No related data.
AT1G32410vacuolar protein sorting 55 family protein / VPS55 family protein
AT1G34150tRNA pseudouridine synthase family protein
AT1G48850No related data.
AT1G48920No related data.
AT1G50030No related data.
AT1G54690No related data.
AT1G55150DEAD box RNA helicase, putative (RH20)
AT1G59820No related data.
AT1G60620No related data.
AT1G60740peroxiredoxin type 2, putative
AT1G61040No related data.
AT1G61950No related data.
AT1G65440No related data.
AT1G66740No related data.
AT1G77720protein kinase family protein
AT1G77840eukaryotic translation initiation factor 5, putative / eIF-5, putative
AT2G04660No related data.
AT2G06210No related data.
AT2G06510No related data.
AT2G20000No related data.
AT2G22400NOL1/NOP2/sun family protein
AT2G24500No related data.
AT2G26060No related data.
AT2G26980No related data.
AT2G2771060S acidic ribosomal protein P2 (RPP2B)
AT2G34720No related data.
AT2G35040AICARFT/IMPCHase bienzyme family protein
AT2G39840No related data.
AT2G40700DEAD/DEAH box helicase, putative (RH17)
AT2G43790No related data.
AT2G47620No related data.
AT3G01090No related data.
AT3G05090transducin family protein / WD-40 repeat family protein
AT3G06200guanylate kinase, putative
AT3G06720No related data.
AT3G07050GTP-binding family protein
AT3G08530clathrin heavy chain, putative
AT3G08790VHS domain-containing protein / GAT domain-containing protein
AT3G12860nucleolar protein Nop56, putative
AT3G15970Ran-binding protein 1 domain-containing protein / RanBP1 domain-containing protein
AT3G19420No related data.
AT3G22590RNA pol II accessory factor Cdc73 family protein
AT3G23890No related data.
AT3G25980mitotic spindle checkpoint protein, putative (MAD2)
AT3G27060No related data.
AT3G27360histone H3
AT3G28730No related data.
AT3G48750No related data.
AT3G53570No related data.
AT3G55050serine/threonine protein phosphatase 2C (PP2C6)
AT3G55200splicing factor, putative
AT3G55220splicing factor, putative
AT3G56150No related data.
AT3G56990No related data.
AT3G57660No related data.
AT3G63460WD-40 repeat family protein
AT4G04885No related data.
AT4G07950DNA-directed RNA polymerase III family protein
AT4G08350No related data.
AT4G10710No related data.
AT4G11420No related data.
AT4G12400stress-inducible protein, putative
AT4G12610No related data.
AT4G15780No related data.
AT4G16630DEAD/DEAH box helicase, putative (RH28)
AT4G16970ATP binding / kinase/ protein kinase/ protein serine/threonine kinase
AT4G21710No related data.
AT4G23570No related data.
AT4G26070No related data.
AT4G26550hypothetical protein
AT4G30890No related data.
AT4G31770calcineurin-like phosphoesterase family protein
AT4G35800No related data.
AT4G38130No related data.
AT5G02570histone H2B, putative
AT5G03080phosphatidic acid phosphatase-related / PAP2-related
AT5G03860No related data.
AT5G10260No related data.
AT5G10270No related data.
AT5G10390histone H3
AT5G10400histone H3
AT5G14050transducin family protein / WD-40 repeat family protein
AT5G14520pescadillo-related
AT5G16500protein kinase family protein
AT5G20570No related data.
AT5G20850No related data.
AT5G20920No related data.
AT5G22840protein kinase family protein
AT5G24940protein phosphatase 2C, putative / PP2C, putative
AT5G25780No related data.
AT5G25800exonuclease family protein
AT5G27620No related data.
AT5G37350RIO1 family protein
AT5G37720RNA and export factor-binding protein, putative
AT5G40440No related data.
AT5G42740glucose-6-phosphate isomerase, cytosolic (PGIC)
AT5G43500No related data.
AT5G46030hypothetical protein
AT5G46750No related data.
AT5G46840RNA recognition motif (RRM)-containing protein
AT5G52640No related data.
AT5G55920No related data.
AT5G56030No related data.
AT5G60990DEAD/DEAH box helicase, putative (RH10)
AT5G61150No related data.
AT5G61550protein kinase family protein
AT5G61770No related data.
AT5G63610No related data.
AT5G63670No related data.
AT5G65360histone H3
AT5G65900DEAD/DEAH box helicase, putative
AT5G67630DNA helicase, putative
AT2G23080casein kinase II alpha chain, putative
AT2G44680No related data.
AT1G59580No related data.
AT4G25340immunophilin-related / FKBP-type peptidyl-prolyl cis-trans isomerase-related

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
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