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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:ATBCAT-5  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT5G65780ATBCAT-5GSP:2 PPI:8ATBCAT-5; branched-chain-amino-acid transaminase/ catalytic.
Subcellar localization
plastid: Pubmed16381842; mitochondrion: Pubmed14764908;
Related organ
carpel      detergent fraction,1-DE      Related article
carpel      urea fraction,1-DE      Related article
carpel      soluble fraction,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
cell suspension culture      SDS fraction,Schagger 1-DE      Related article
flower      SDS fraction,1-DE      Related article
flower      soluble fraction,1-DE      Related article
flower bud      soluble fraction,1-DE      Related article
juvenile leaf      soluble fraction,1-DE      Related article
pollen      combined fractions, 1-DE      Related article
pollen      soluble fraction, 1-DE      Related article
pollen      urea fraction, 1-DE      Related article
root      soluble fraction,1-DE      Related article
root      SDS fraction,1-DE      Related article
seed      detergent fraction,1-DE      Related article
seed      urea fraction,1-DE      Related article
seed      soluble fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      soluble fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
shoot      Flow through fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
Representative Gene Model Description
AT5G65780.1:ATBCAT-5; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: BCAT3 (BRANCHED-CHAIN AMINOTRANSFERASE 3); branched-chain-amino-acid transaminase/ catalytic (TAIR:AT3G49680.2); Has 8524 Blast hits to 8522 proteins in 1375 species: Archae - 99; Bacteria - 4041; Metazoa - 245; Fungi - 260; Plants - 157; Viruses - 0; Other Eukaryotes - 3722 (source: NCBI BLink).

Related KEGG pathway    
Metabolic Pathways
   |----------Amino Acid Metabolism
   |--------------------Valine, leucine and isoleucine degradationLink to keggView overall Pathway
   |--------------------Valine, leucine and isoleucine biosynthesisLink to keggView overall Pathway
   |----------Metabolism of Cofactors and Vitamins
   |--------------------Pantothenate and CoA biosynthesisLink to keggView overall Pathway
   |----------Biosynthesis of Secondary Metabolites
   |--------------------Glucosinolate biosynthesisLink to keggView overall Pathway
Database cross-references
TAIR Gene: AT5G65780;
IPI: IPI00539930;
UniParc: UPI00001267C9;
REFSEQ_PROVISIONAL: NP_201379.2;
KEGG: AT5G65780;

GSPannotationmethodsrelated
AT3G18130(RACK1C_AT)RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C); nucleotide bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G18130(RACK1C_AT)RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C); nucleotide bindingtext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT1G50090aminotransferase class IV family protein
AT1G10070No related data.
AT3G49680No related data.
AT1G50110branched-chain amino acid aminotransferase 6 / branched-chain amino acid transaminase 6 (BCAT6)
AT1G10060No related data.
AT3G19710No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
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