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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:TGA1  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT5G65210TGA1GSP:60 PPI:62TGA1; DNA binding / calmodulin binding / transcription factor.
Subcellar localization
nucleus: Pubmed16381842;
Representative Gene Model Description
AT5G65210.1:TGA1; FUNCTIONS IN: transcription factor activity, calmodulin binding, DNA binding; INVOLVED IN: defense response to bacterium; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGA4 (TGACG MOTIF-BINDING FACTOR 4); DNA binding / calmodulin binding / transcription factor (TAIR:AT5G10030.1); Has 474 Blast hits to 473 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 439; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).

AT5G65210.2:TGA1; FUNCTIONS IN: transcription factor activity, calmodulin binding, DNA binding; INVOLVED IN: defense response to bacterium; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGA4 (TGACG MOTIF-BINDING FACTOR 4); DNA binding / calmodulin binding / transcription factor (TAIR:AT5G10030.1); Has 474 Blast hits to 473 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 439; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).

AT5G65210.3:TGA1; FUNCTIONS IN: transcription factor activity, calmodulin binding, DNA binding; INVOLVED IN: defense response to bacterium; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGA4 (TGACG MOTIF-BINDING FACTOR 4); DNA binding / calmodulin binding / transcription factor (TAIR:AT5G10030.1); Has 474 Blast hits to 473 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 439; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).

AT5G65210.4:TGA1; FUNCTIONS IN: transcription factor activity, calmodulin binding, DNA binding; INVOLVED IN: defense response to bacterium; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGA4 (TGACG MOTIF-BINDING FACTOR 4); DNA binding / calmodulin binding / transcription factor (TAIR:AT5G10030.1); Has 474 Blast hits to 473 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 439; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).

AT5G65210.5:TGA1; FUNCTIONS IN: transcription factor activity, calmodulin binding, DNA binding; INVOLVED IN: defense response to bacterium; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGA4 (TGACG MOTIF-BINDING FACTOR 4); DNA binding / calmodulin binding / transcription factor (TAIR:AT5G10030.1); Has 474 Blast hits to 473 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 439; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).

AT5G65210.6:TGA1; FUNCTIONS IN: transcription factor activity, calmodulin binding, DNA binding; INVOLVED IN: defense response to bacterium; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGA4 (TGACG MOTIF-BINDING FACTOR 4); DNA binding / calmodulin binding / transcription factor (TAIR:AT5G10030.1); Has 434 Blast hits to 433 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 411; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT5G65210;
IPI: IPI00846716; IPI00523913;
UniParc: UPI000150564C; UPI00000A0502;
REFSEQ_PROVISIONAL: NP_001078800.1; NP_201324.1; NP_851273.1; NP_001032147.1; NP_001032148.1; NP_001032149.1;
KEGG: AT5G65210;

GSPannotationmethodsrelated
AT1G64280(NPR1)NPR1 (NONEXPRESSER OF PR GENES 1); protein binding / transcription activatortext mining 10662863 10659709(yeast-2-hybrid assay)
AT1G02780(emb2386)emb2386 (embryo defective 2386); structural constituent of ribosometext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G13350protein kinase family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G30230elongation factor 1-beta / EF-1-betatext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G52740(HTA9)HTA9 (HISTONE H2A PROTEIN 9); DNA bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G69530(ATEXPA1)ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1)text mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G75330(OTC)OTC (ORNITHINE CARBAMOYLTRANSFERASE); amino acid binding / carboxyl- or carbamoyltransferase/ ornithine carbamoyltransferasetext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT2G02510hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT2G2158040S ribosomal protein S25 (RPS25B)text mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G01820adenylate kinase family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G20390endoribonuclease L-PSP family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G48000(ALDH2B4)ALDH2B4 (ALDEHYDE DEHYDROGENASE 2B4); 3-chloroallyl aldehyde dehydrogenase/ ATP binding / aldehyde dehydrogenase (NAD)text mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G53190pectate lyase family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G00100(ATRPS13A)ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN S13A); structural constituent of ribosometext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G15160lipid binding / structural constituent of cell walltext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G16450hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G1810060S ribosomal protein L32 (RPL32A)text mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G32690(GLB3)GLB3; oxygen transportertext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G0245060S ribosomal protein L36 (RPL36C)text mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G10360(EMB3010)EMB3010 (embryo defective 3010); structural constituent of ribosometext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G20150(SPX1)SPX1 (SPX DOMAIN GENE 1)text mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G48330regulator of chromosome condensation (RCC1) family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G48930(HCT)HCT (HYDROXYCINNAMOYL-COA SHIKIMATE/QUINATE HYDROXYCINNAMOYL TRANSFERASE); quinate O-hydroxycinnamoyltransferase/ shikimate O-hydroxycinnamoyltransferase/ transferasetext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G54900(ATRBP45A)ATRBP45A (RNA-binding protein 45A); RNA bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G55160(SUMO2)SUMO2 (SMALL UBIQUITIN-LIKE MODIFIER 2); protein binding / protein tagtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G59880(ADF3)ADF3 (ACTIN DEPOLYMERIZING FACTOR 3); actin bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G66930hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G30230elongation factor 1-beta / EF-1-betatext mining 21952135(yeast-2-hybrid)
AT5G65210(TGA1)TGA1; DNA binding / calmodulin binding / transcription factortext mining 11442055(yeast-2-hybrid)
AT1G64280(NPR1)NPR1 (NONEXPRESSER OF PR GENES 1); protein binding / transcription activatortext mining 12953119(yeast-2-hybrid)
AT2G25700(SK3)No related data.text mining 21798944(yeast-2-hybrid)
AT5G48930(HCT)HCT (HYDROXYCINNAMOYL-COA SHIKIMATE/QUINATE HYDROXYCINNAMOYL TRANSFERASE); quinate O-hydroxycinnamoyltransferase/ shikimate O-hydroxycinnamoyltransferase/ transferasetext mining 21952135(yeast-2-hybrid)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)
AT2G38300DNA binding / transcription factortext mining 21798944(yeast-2-hybrid)
AT1G75330(OTC)OTC (ORNITHINE CARBAMOYLTRANSFERASE); amino acid binding / carboxyl- or carbamoyltransferase/ ornithine carbamoyltransferasetext mining 21952135(yeast-2-hybrid)
AT3G01820adenylate kinase family proteintext mining 21952135(yeast-2-hybrid)
AT3G48000(ALDH2B4)ALDH2B4 (ALDEHYDE DEHYDROGENASE 2B4); 3-chloroallyl aldehyde dehydrogenase/ ATP binding / aldehyde dehydrogenase (NAD)text mining 21952135(yeast-2-hybrid)
AT3G53190pectate lyase family proteintext mining 21952135(yeast-2-hybrid)
AT5G55160(SUMO2)SUMO2 (SMALL UBIQUITIN-LIKE MODIFIER 2); protein binding / protein tagtext mining 21952135(yeast-2-hybrid)
AT1G52740(HTA9)HTA9 (HISTONE H2A PROTEIN 9); DNA bindingtext mining 21952135(yeast-2-hybrid)
AT1G69530(EXPA1)No related data.text mining 21952135(yeast-2-hybrid)
AT5G20150(SPX1)SPX1 (SPX DOMAIN GENE 1)text mining 21952135(yeast-2-hybrid)
AT2G02510hypothetical proteintext mining 21952135(yeast-2-hybrid)
AT4G16450hypothetical proteintext mining 21952135(yeast-2-hybrid)
AT4G19660(NPR4)NPR4 (NPR1-like protein 4); protein bindingtext mining 17076807(yeast-2-hybrid)
AT5G10360(EMB3010)EMB3010 (embryo defective 3010); structural constituent of ribosometext mining 21952135(yeast-2-hybrid)
AT1G13350protein kinase family proteintext mining 21952135(yeast-2-hybrid)
AT2G2158040S ribosomal protein S25 (RPS25B)text mining 21952135(yeast-2-hybrid)
AT4G1810060S ribosomal protein L32 (RPL32A)text mining 21952135(yeast-2-hybrid)
AT5G59880(ADF3)ADF3 (ACTIN DEPOLYMERIZING FACTOR 3); actin bindingtext mining 21952135(yeast-2-hybrid)
AT5G0245060S ribosomal protein L36 (RPL36C)text mining 21952135(yeast-2-hybrid)
AT1G02780(emb2386)emb2386 (embryo defective 2386); structural constituent of ribosometext mining 21952135(yeast-2-hybrid)
AT3G20390endoribonuclease L-PSP family proteintext mining 21952135(yeast-2-hybrid)
AT4G32690(GLB3)GLB3; oxygen transportertext mining 21952135(yeast-2-hybrid)
AT4G00100(RPS13A)No related data.text mining 21952135(yeast-2-hybrid)
AT5G54900(RBP45A)No related data.text mining 21952135(yeast-2-hybrid)
AT4G15160lipid binding / structural constituent of cell walltext mining 21952135(yeast-2-hybrid)
AT5G48330regulator of chromosome condensation (RCC1) family proteintext mining 21952135(yeast-2-hybrid)
AT5G66930hypothetical proteintext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT5G10030No related data.
AT1G77920bZIP family transcription factor

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

Transcription factorTarget geneDetail infoRelated Artical
HY5 [AT5G11260]AT5G65210 Relationship:Repressed Detected Organs:Hypocotyl 17337630
HY5 [AT5G11260]AT5G65210 Relationship:Repressed Detected Organs:Root 17337630

 

TFFamilyConfidenceDetails
AGMADSLAT4G18960
AGL1MADSLAT3G58780
AGL15MADSLAT5G13790
AGL3MADSHAT2G03710
ATHB1HD-ZIPHAT3G01470
RAV1(2)AP2/EREBPHAT1G13260

Related PPIs for TFs
TF1TF2PPI
AT4G18960AT3G58780GO
AT4G18960AT5G13790GO
AT3G58780AT5G13790GO