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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT5G56750  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT5G56750AT5G56750GSP:122 PPI:123Ndr family protein.
Representative Gene Model Description
AT5G56750.1:Ndr family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell differentiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pollen specific protein SF21 (InterPro:IPR015511), Ndr (InterPro:IPR004142); BEST Arabidopsis thaliana protein match is: Ndr family protein (TAIR:AT2G19620.1); Has 620 Blast hits to 620 proteins in 81 species: Archae - 0; Bacteria - 31; Metazoa - 480; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT5G56750;
IPI: IPI00546806;
UniParc: UPI00000A04C2;
REFSEQ_PROVISIONAL: NP_200486.1;
KEGG: AT5G56750;

GSPannotationmethodsrelated
AT1G03680(ATHM1)ATHM1; enzyme activatortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G08465(YAB2)YAB2 (YABBY2); transcription factortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G10740hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G16470(PAB1)PAB1 (PROTEASOME SUBUNIT PAB1); endopeptidase/ peptidase/ threonine-type endopeptidasetext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G20696(HMGB3)HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcription factortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G22970hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G35720(ANNAT1)ANNAT1 (ANNEXIN ARABIDOPSIS 1); ATP binding / calcium ion binding / calcium-dependent phospholipid binding / copper ion binding / peroxidase/ protein homodimerizationtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G50010(TUA2)TUA2; structural constituent of cytoskeletontext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G51710(UBP6)UBP6 (UBIQUITIN-SPECIFIC PROTEASE 6); calmodulin binding / ubiquitin-specific proteasetext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G63690protease-associated (PA) domain-containing proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G72900disease resistance protein (TIR-NBS class), putativetext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G72920disease resistance protein (TIR-NBS class), putativetext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G75420glycosyl transferase family 1 proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G79510hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT2G16280(KCS9)KCS9 (3-KETOACYL-COA SYNTHASE 9); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groupstext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT2G16600(ROC3)ROC3; peptidyl-prolyl cis-trans isomerasetext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT2G19170(SLP3)SLP3; serine-type peptidasetext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT2G24270(ALDH11A3)ALDH11A3; 3-chloroallyl aldehyde dehydrogenase/ glyceraldehyde-3-phosphate dehydrogenase (NADP+)text mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT2G24420DNA repair ATPase-relatedtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT2G27970(CKS2)CKS2 (CDK-subunit 2); cyclin-dependent protein kinase/ cyclin-dependent protein kinase regulatortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT2G29530mitochondrial import inner membrane translocase (TIM10)text mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT2G31360(ADS2)ADS2 (16:0Delta9 Arabidopsis desaturase 2); oxidoreductasetext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT2G37570(SLT1)SLT1 (sodium- and lithium-tolerant 1)text mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT2G46500phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G01500(CA1)CA1 (CARBONIC ANHYDRASE 1); carbonate dehydratase/ zinc ion bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G0484040S ribosomal protein S3A (RPS3aA)text mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G09390(MT2A)MT2A (METALLOTHIONEIN 2A); copper ion bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G19760eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putativetext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G25800(PP2AA2)PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2); protein phosphatase type 2A regulatortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G45140(LOX2)LOX2 (LIPOXYGENASE 2); lipoxygenasetext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G53620(AtPPa4)AtPPa4 (Arabidopsis thaliana pyrophosphorylase 4); inorganic diphosphatasetext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G61110(ARS27A)ARS27A (ARABIDOPSIS RIBOSOMAL PROTEIN S27); structural constituent of ribosometext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G62460hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G62720(XT1)XT1 (XYLOSYLTRANSFERASE 1); UDP-xylosyltransferase/ transferase/ transferase, transferring glycosyl groups / xyloglucan 6-xylosyltransferasetext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G10840kinesin light chain-relatedtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G14880(OASA1)OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1); cysteine synthasetext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G16240hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G16450hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G16500cysteine protease inhibitor family protein / cystatin family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G18480(CHLI1)CHLI1; ATPase/ magnesium chelatasetext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G20380zinc finger protein (LSD1)text mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G29780hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G38550hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G386901-phosphatidylinositol phosphodiesterase-relatedtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G39330(CAD9)CAD9 (CINNAMYL ALCOHOL DEHYDROGENASE 9); binding / catalytic/ oxidoreductase/ zinc ion bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G40030histone H3.2text mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G03290isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putativetext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G16840(BPA1)BPA1 (BINDINGPARTNEROFACD11 1); nucleic acid binding / nucleotide binding / oxidoreductasetext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G17920(ATMS1)ATMS1; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase/ copper ion binding / methionine synthasetext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G23630ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase familiy proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G24710hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G24740hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G25100endomembrane protein 70, putativetext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G43940(HOT5)HOT5 (sensitive to hot temperatures 5); S-(hydroxymethyl)glutathione dehydrogenase/ S-nitrosoglutathione reductasetext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G46780VQ motif-containing proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G53400nuclear movement family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G34460(AGB1)AGB1 (GTP BINDING PROTEIN BETA 1); GTPase/ nucleotide binding / protein bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G57740(XBAT32)XBAT32; protein binding / zinc ion bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G60920(COB)apocytochrome Btext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G63370protein kinase family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G17730(SYP23)SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G40030histone H3.2text mining 21952135(yeast-2-hybrid)
AT1G63690(SPPL2)No related data.text mining 21952135(yeast-2-hybrid)
AT1G35720(ANNAT1)ANNAT1 (ANNEXIN ARABIDOPSIS 1); ATP binding / calcium ion binding / calcium-dependent phospholipid binding / copper ion binding / peroxidase/ protein homodimerizationtext mining 21952135(yeast-2-hybrid)
AT1G75420glycosyl transferase family 1 proteintext mining 21952135(yeast-2-hybrid)
AT5G23630(PDR2)PDR2 (PLEIOTROPIC DRUG RESISTANCE 2); ATPase, coupled to transmembrane movement of substancestext mining 21952135(yeast-2-hybrid)
AT1G51710(UBP6)UBP6 (UBIQUITIN-SPECIFIC PROTEASE 6); calmodulin binding / ubiquitin-specific proteasetext mining 21952135(yeast-2-hybrid)
AT5G60920(COB)apocytochrome Btext mining 21952135(yeast-2-hybrid)
AT5G17920(ATMS1)ATMS1; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase/ copper ion binding / methionine synthasetext mining 21952135(yeast-2-hybrid)
AT2G31360(DS2)No related data.text mining 21952135(yeast-2-hybrid)
AT1G50010(TUA2)TUA2; structural constituent of cytoskeletontext mining 21952135(yeast-2-hybrid)
AT2G27970(CKS2)CKS2 (CDK-subunit 2); cyclin-dependent protein kinase/ cyclin-dependent protein kinase regulatortext mining 21952135(yeast-2-hybrid)
AT5G16840(BPA1)BPA1 (BINDINGPARTNEROFACD11 1); nucleic acid binding / nucleotide binding / oxidoreductasetext mining 21952135(yeast-2-hybrid)
AT1G16470(PAB1)PAB1 (PROTEASOME SUBUNIT PAB1); endopeptidase/ peptidase/ threonine-type endopeptidasetext mining 21952135(yeast-2-hybrid)
AT1G10740hypothetical proteintext mining 21952135(yeast-2-hybrid)
AT4G17730(SYP23)SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptortext mining 21952135(yeast-2-hybrid)
AT2G16600(ROC3)ROC3; peptidyl-prolyl cis-trans isomerasetext mining 21952135(yeast-2-hybrid)
AT3G62460hypothetical proteintext mining 21952135(yeast-2-hybrid)
AT5G57740(XBAT32)XBAT32; protein binding / zinc ion bindingtext mining 21952135(yeast-2-hybrid)
AT3G53620(PPa4)No related data.text mining 21952135(yeast-2-hybrid)
AT4G38550hypothetical proteintext mining 21952135(yeast-2-hybrid)
AT3G0484040S ribosomal protein S3A (RPS3aA)text mining 21952135(yeast-2-hybrid)
AT4G18480(CHLI1)CHLI1; ATPase/ magnesium chelatasetext mining 21952135(yeast-2-hybrid)
AT4G20380zinc finger protein (LSD1)text mining 21952135(yeast-2-hybrid)
AT4G16240hypothetical proteintext mining 21952135(yeast-2-hybrid)
AT3G19760(EIF4A-III)No related data.text mining 21952135(yeast-2-hybrid)
AT1G79510hypothetical proteintext mining 21952135(yeast-2-hybrid)
AT2G16280(KCS9)KCS9 (3-KETOACYL-COA SYNTHASE 9); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groupstext mining 21952135(yeast-2-hybrid)
AT3G62720(XT1)XT1 (XYLOSYLTRANSFERASE 1); UDP-xylosyltransferase/ transferase/ transferase, transferring glycosyl groups / xyloglucan 6-xylosyltransferasetext mining 21952135(yeast-2-hybrid)
AT1G72900disease resistance protein (TIR-NBS class), putativetext mining 21952135(yeast-2-hybrid)
AT1G22970hypothetical proteintext mining 21952135(yeast-2-hybrid)
AT5G43940(HOT5)HOT5 (sensitive to hot temperatures 5); S-(hydroxymethyl)glutathione dehydrogenase/ S-nitrosoglutathione reductasetext mining 21952135(yeast-2-hybrid)
AT5G24710hypothetical proteintext mining 21952135(yeast-2-hybrid)
AT2G46500(PI4K GAMMA 4)No related data.text mining 21952135(yeast-2-hybrid)
AT2G19170(SLP3)SLP3; serine-type peptidasetext mining 21952135(yeast-2-hybrid)
AT5G46780VQ motif-containing proteintext mining 21952135(yeast-2-hybrid)
AT4G16450hypothetical proteintext mining 21952135(yeast-2-hybrid)
AT3G25800(PP2AA2)PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2); protein phosphatase type 2A regulatortext mining 21952135(yeast-2-hybrid)
AT4G39330(CAD9)CAD9 (CINNAMYL ALCOHOL DEHYDROGENASE 9); binding / catalytic/ oxidoreductase/ zinc ion bindingtext mining 21952135(yeast-2-hybrid)
AT5G24740hypothetical proteintext mining 21952135(yeast-2-hybrid)
AT2G29530(TIM10)No related data.text mining 21952135(yeast-2-hybrid)
AT4G10840kinesin light chain-relatedtext mining 21952135(yeast-2-hybrid)
AT4G16500cysteine protease inhibitor family protein / cystatin family proteintext mining 21952135(yeast-2-hybrid)
AT5G63370protein kinase family proteintext mining 21952135(yeast-2-hybrid)
AT5G25100endomembrane protein 70, putativetext mining 21952135(yeast-2-hybrid)
AT4G29780hypothetical proteintext mining 21952135(yeast-2-hybrid)
AT5G03290(IDH-V)No related data.text mining 21952135(yeast-2-hybrid)
AT1G03680(THM1)No related data.text mining 21952135(yeast-2-hybrid)
AT2G24270(ALDH11A3)ALDH11A3; 3-chloroallyl aldehyde dehydrogenase/ glyceraldehyde-3-phosphate dehydrogenase (NADP+)text mining 21952135(yeast-2-hybrid)
AT1G72920disease resistance protein (TIR-NBS class), putativetext mining 21952135(yeast-2-hybrid)
AT4G386901-phosphatidylinositol phosphodiesterase-relatedtext mining 21952135(yeast-2-hybrid)
AT3G45140(LOX2)LOX2 (LIPOXYGENASE 2); lipoxygenasetext mining 21952135(yeast-2-hybrid)
AT3G61110(RS27A)No related data.text mining 21952135(yeast-2-hybrid)
AT1G08465(YAB2)YAB2 (YABBY2); transcription factortext mining 21952135(yeast-2-hybrid)
AT4G34460(AGB1)AGB1 (GTP BINDING PROTEIN BETA 1); GTPase/ nucleotide binding / protein bindingtext mining 21952135(yeast-2-hybrid)
AT3G09390(MT2A)MT2A (METALLOTHIONEIN 2A); copper ion bindingtext mining 21952135(yeast-2-hybrid)
AT4G14880(OASA1)OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1); cysteine synthasetext mining 21952135(yeast-2-hybrid)
AT3G01500(CA1)CA1 (CARBONIC ANHYDRASE 1); carbonate dehydratase/ zinc ion bindingtext mining 21952135(yeast-2-hybrid)
AT2G37570(SLT1)SLT1 (sodium- and lithium-tolerant 1)text mining 21952135(yeast-2-hybrid)
AT5G53400(BOB1)No related data.text mining 21952135(yeast-2-hybrid)
AT2G24420DNA repair ATPase-relatedtext mining 21952135(yeast-2-hybrid)
AT1G20696(HMGB3)HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcription factortext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT2G19620Ndr family protein

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

TFFamilyConfidenceDetails
AGL1MADSLAT3G58780
ARR10GARPLAT4G31920
ATHB1HD-ZIPLAT3G01470
ATHB5HD-ZIPHAT5G65310
GT-1TrihelixLAT1G13450
ID1C2H2(Zn)LAT1G25250
RAV1(2)AP2/EREBPHAT1G13260