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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:THI1  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT5G54770THI1GSP:5 PPI:16THI1; protein homodimerization.
Subcellar localization
plastid: Pubmed16381842; mitochondrion: Pubmed11575719;
Related organ
carpel      detergent fraction,1-DE      Related article
carpel      urea fraction,1-DE      Related article
carpel      soluble fraction,1-DE      Related article
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      SDS fraction,1-DE      Related article
cell suspension culture      detergent fraction,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
cell suspension culture      triton fraction,Schagger 1-DE      Related article
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
cell suspension culture      SDS fraction,Schagger 1-DE      Related article
cotyledon      SDS fraction,1-DE      Related article
cotyledon      soluble fraction,1-DE      Related article
flower      SDS fraction,1-DE      Related article
flower      soluble fraction,1-DE      Related article
flower bud      SDS fraction,1-DE      Related article
flower bud      soluble fraction,1-DE      Related article
juvenile leaf      SDS fraction,1-DE      Related article
juvenile leaf      soluble fraction,1-DE      Related article
root      soluble fraction,1-DE      Related article
seed      detergent fraction,1-DE      Related article
seed      urea fraction,1-DE      Related article
seed      soluble fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      soluble fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
shoot      Flow through fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Flow through fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchae; IMAC affinity chromatography ng      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
Representative Gene Model Description
AT5G54770.1:THI1; FUNCTIONS IN: protein homodimerization activity; INVOLVED IN: oxazole or thiazole biosynthetic process, response to cold, thiamin biosynthetic process, response to DNA damage stimulus; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine biosynthesis Thi4 protein (InterPro:IPR002922); Has 427 Blast hits to 425 proteins in 173 species: Archae - 123; Bacteria - 61; Metazoa - 1; Fungi - 120; Plants - 96; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).

Related Mutant  
M0236 Related gene:AT3G27920; AT5G54770;
Method:NULL
Phenotype:leaves but not cotyledons white, conditional lethal, 4-methyl-5-hydroxyethyl-thiazole or thiamine restores to normal; trichomes absent on leaves and stems, some trichomes in leaf margins.
Related PO:trichome  PO:0000282    leaf  PO:0009025          
Related Datasource Link:

M0351 Related gene:AT5G54770;
Method:ethylmethane sulfonate
Phenotype:leaves but not cotyledons white, conditional lethal, 4-methyl-5-hydroxyethyl-thiazole or thiamine restores to normal.
Related PO:leaf  PO:0009025          
Related Datasource Link:

M0352 Related gene:AT5G54770;
Method:x-rays
Phenotype:leaves but not cotyledons white, conditional lethal, 4-methyl-5-hydroxyethyl-thiazole or thiamine restores to normal; yellow seeds (lacks brown pigment in seed coat).
Related PO:leaf  PO:0009025    seed  PO:0009010          
Related Datasource Link:
*

Predicted Mutant Phenotypes
chlorenchyma    PO:0005426;    
Database cross-references
TAIR Gene: AT5G54770;
KEGG: AT5G54770;

GSPannotationmethodsrelated
AT5G14240hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G14240hypothetical proteintext mining 21952135(yeast-2-hybrid)
AT5G19855hypothetical proteintext mining 21922322(Affinity Capture-MS)
AT5G38480(GRF3)GRF3 (GENERAL REGULATORY FACTOR 3); ATP binding / protein binding / protein phosphorylated amino acid bindingtext mining 21094157(Affinity Capture-MS)
AT4G04330hypothetical proteintext mining 21922322(Affinity Capture-MS)

 

Predicted
Functional Partners
annotationTotal
AT1G03530No related data.
AT1G55860No related data.
AT1G68310vacuolar sorting signal binding
AT2G33610No related data.
AT3G06720No related data.
AT3G43810No related data.
AT3G50360No related data.
AT5G52640No related data.
AT5G56030No related data.
ATCG00830No related data.
ATCG01310No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

TFFamilyConfidenceDetails
AGL3MADSLAT2G03710
ATHB1HD-ZIPLAT3G01470
RAV1(2)AP2/EREBPHAT1G13260
TGA1bZIPLAT5G65210