Home Contact Sitemap

AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT5G50100  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT5G50100AT5G50100GSP:5 PPI:5hypothetical protein.
Subcellar localization
chloroplast    Based on Chloroplast Proteomics data;
Related organ
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      triton fraction,Schagger 1-DE      Related article
flower      SDS fraction,1-DE      Related article
root      SDS fraction,1-DE      Related article
seed      detergent fraction,1-DE      Related article
seed      soluble fraction,1-DE      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
Representative Gene Model Description
AT5G50100.1:FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin-like fold (InterPro:IPR012336), Putative thiol-disulphide oxidoreductase DCC (InterPro:IPR007263); Has 598 Blast hits to 598 proteins in 152 species: Archae - 0; Bacteria - 266; Metazoa - 3; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink).

Predicted Mutant Phenotypes
phloem    PO:0005417;    
Database cross-references
TAIR Gene: AT5G50100;
IPI: IPI00520237;
UniParc: UPI00000A99DA;
REFSEQ_PROVISIONAL: NP_568719.1;
KEGG: AT5G50100;

GSPannotationmethodsrelated
AT4G14716(ATARD1)ATARD1 (ACIREDUCTONE DIOXYGENASE 1); acireductone dioxygenase [iron(II)-requiring]/ metal ion bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G68185ubiquitin-relatedtext mining 20855607(yeast-2-hybrid)
AT4G08150(KNAT1)KNAT1 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA); transcription factortext mining 21798944(yeast-2-hybrid)
AT4G14716(ARD1)No related data.text mining 21952135(yeast-2-hybrid)
AT1G47260(GAMMA CA2)No related data.text mining 21798944(yeast-2-hybrid)

 


Transcriptional Regulation

TFFamilyConfidenceDetails
AGMADSLAT4G18960
ATHB1HD-ZIPHAT3G01470
ATHB5HD-ZIPHAT5G65310
RAV1(2)AP2/EREBPHAT1G13260
TGA1bZIPHAT5G65210