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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:HCT  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT5G48930HCTGSP:5 PPI:6HCT (HYDROXYCINNAMOYL-COA SHIKIMATE/QUINATE HYDROXYCINNAMOYL TRANSFERASE); quinate O-hydroxycinnamoyltransferase/ shikimate O-hydroxycinnamoyltransferase/ transferase.
Related organ
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
flower      soluble fraction,1-DE      Related article
flower bud      soluble fraction,1-DE      Related article
juvenile leaf      SDS fraction,1-DE      Related article
pollen      soluble fraction, 1-DE      Related article
root      soluble fraction,1-DE      Related article
root      SDS fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      soluble fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
Representative Gene Model Description
AT5G48930.1:HYDROXYCINNAMOYL-COA SHIKIMATE/QUINATE HYDROXYCINNAMOYL TRANSFERASE (HCT); FUNCTIONS IN: shikimate O-hydroxycinnamoyltransferase activity, transferase activity, quinate O-hydroxycinnamoyltransferase activity; INVOLVED IN: auxin homeostasis, lignin biosynthetic process, positive regulation of flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: transferase family protein (TAIR:AT5G57840.1); Has 1599 Blast hits to 1584 proteins in 162 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 239; Plants - 1357; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

Related Mutant  
    M2598 Related gene:AT5G48930; AT5G48940;
    Method:T-DNA insertion
    Phenotype:General,files
    Related Datasource Link:Riken database
    *

    Database cross-references
    TAIR Gene: AT5G48930;
    IPI: IPI00532885;
    UniParc: UPI0000048C2F;
    REFSEQ_PROVISIONAL: NP_199704.1;
    KEGG: AT5G48930;

    GSPannotationmethodsrelated
    AT5G65210(TGA1)TGA1; DNA binding / calmodulin binding / transcription factortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
    AT5G03240(UBQ3)UBQ3 (POLYUBIQUITIN 3); protein bindingtext mining 23667124(Affinity Capture-MS)
    AT5G65210(TGA1)TGA1; DNA binding / calmodulin binding / transcription factortext mining 21952135(yeast-2-hybrid)
    AT5G14700cinnamoyl-CoA reductase-relatedtext mining 21798944(yeast-2-hybrid)
    -(RAD23A)No related data.text mining 19292762(Reconstituted Complex)

     

    Predicted
    Functional Partners
    annotationTotal
    AT2G40230transferase family protein

    O: Ortholog interaction datasets
    G: Shared biological function:Go Ontology
    E: Co-expression
    F: Gene fusion method
    N: Gene neighbors method
    P: Phylogenetic profile method
    D: Enriched domain pair
    What does the displayed number mean when your mouse moved over a certain icon?(LR)


    Transcriptional Regulation

    Transcription factorTarget geneDetail infoRelated Artical
    SEPALLATA3[AT1G24260]AT5G48930No detail info. 19385720

     

    TFFamilyConfidenceDetails
    AGL15MADSLAT5G13790
    ARR10GARPLAT4G31920
    BZIP12bZIPLAT2G41070
    ID1C2H2(Zn)LAT1G25250
    RAV1(2)AP2/EREBPLAT1G13260
    TGA1bZIPLAT5G65210