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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT5G46780  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT5G46780AT5G46780GSP:4 PPI:4VQ motif-containing protein.
Related organ
root      SDS fraction,1-DE      Related article
seed      detergent fraction,1-DE      Related article
Representative Gene Model Description
AT5G46780.1:VQ motif-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT2G35230.1); Has 4220 Blast hits to 3332 proteins in 353 species: Archae - 0; Bacteria - 235; Metazoa - 1741; Fungi - 535; Plants - 1009; Viruses - 213; Other Eukaryotes - 487 (source: NCBI BLink).

AT5G46780.2:VQ motif-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT2G35230.1); Has 4220 Blast hits to 3332 proteins in 353 species: Archae - 0; Bacteria - 235; Metazoa - 1741; Fungi - 535; Plants - 1009; Viruses - 213; Other Eukaryotes - 487 (source: NCBI BLink).

Predicted Mutant Phenotypes
phloem    PO:0005417;    
Database cross-references
TAIR Gene: AT5G46780;
IPI: IPI00546647;
UniParc: UPI00000A33B1;
REFSEQ_PROVISIONAL: NP_199490.1; NP_851143.1;
KEGG: AT5G46780;

GSPannotationmethodsrelated
AT5G56750Ndr family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G11520(CYCB1;3)CYCB1;3 (CYCLIN B1;3); cyclin-dependent protein kinase regulatortext mining 20706207(Affinity Capture-MS)
AT5G56750(NDL1)No related data.text mining 21952135(yeast-2-hybrid)
AT4G26640(WRKY20)WRKY20; transcription factortext mining 21798944(yeast-2-hybrid)

 


Transcriptional Regulation

TFFamilyConfidenceDetails
AGL1MADSLAT3G58780
ATHB1HD-ZIPHAT3G01470
ATHB5HD-ZIPHAT5G65310
RAV1(2)AP2/EREBPHAT1G13260
TGA1bZIPHAT5G65210