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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT5G42000  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT5G42000AT5G42000GSP:4 PPI:106ORMDL family protein.
Related organ
cell suspension culture      full cell extract,1-DE      Related article
Representative Gene Model Description
AT5G42000.1:ORMDL family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding; LOCATED IN: integral to membrane, endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ORMDL (InterPro:IPR007203); BEST Arabidopsis thaliana protein match is: ORMDL family protein (TAIR:AT1G01230.1); Has 398 Blast hits to 398 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 233; Fungi - 101; Plants - 52; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).

AT5G42000.2:ORMDL family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding; LOCATED IN: integral to membrane, endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ORMDL (InterPro:IPR007203); BEST Arabidopsis thaliana protein match is: ORMDL family protein (TAIR:AT1G01230.1).

Database cross-references
TAIR Gene: AT5G42000;
IPI: IPI00939014; IPI00530285;
UniParc: UPI0001A7B2A9; UPI00000A7A0E;
REFSEQ_PROVISIONAL: NP_199015.1; NP_001154758.1;
KEGG: AT5G42000;

GSPannotationmethodsrelated
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G31840(ENODL15)No related data.text mining 24833385(PCA)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)
AT1G78920(VP2)No related data.text mining 24833385(PCA)

 

Predicted
Functional Partners
annotationTotal
AT1G03190No related data.
AT1G05055No related data.
AT1G06470phosphate translocator-related
AT1G07420No related data.
AT1G07810No related data.
AT1G08820No related data.
AT1G11680No related data.
AT1G11890No related data.
AT1G13580No related data.
AT1G24190No related data.
AT1G26690emp24/gp25L/p24 family protein
AT1G27980No related data.
AT1G31910GHMP kinase family protein
AT1G32410vacuolar protein sorting 55 family protein / VPS55 family protein
AT1G36980hypothetical protein
AT1G47290No related data.
AT1G51160synbindin, putative
AT1G54320LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein
AT1G54690No related data.
AT1G59820No related data.
AT1G61040No related data.
AT1G67730No related data.
AT1G69640No related data.
AT1G71270No related data.
AT1G75510transcription initiation factor IIF beta subunit (TFIIF-beta) family protein
AT2G01720ribophorin I family protein
AT2G01770No related data.
AT2G02760No related data.
AT2G18020No related data.
AT2G21440RNA recognition motif (RRM)-containing protein
AT2G22425peptidase
AT2G26980No related data.
AT2G28860No related data.
AT2G34770No related data.
AT2G44950No related data.
AT2G45200No related data.
AT3G01850ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative
AT3G02590delta 7-sterol-C5-desaturase, putative
AT3G02820zinc knuckle (CCHC-type) family protein
AT3G05520F-actin capping protein alpha subunit family protein
AT3G09900No related data.
AT3G10640No related data.
AT3G22590RNA pol II accessory factor Cdc73 family protein
AT3G22845emp24/gp25L/p24 protein-related
AT3G43590zinc knuckle (CCHC-type) family protein
AT3G48430No related data.
AT3G49660transducin family protein / WD-40 repeat family protein
AT3G51460No related data.
AT3G54840No related data.
AT3G55360No related data.
AT3G55380No related data.
AT3G56200amino acid transporter family protein
AT3G58490phosphatidic acid phosphatase family protein / PAP2 family protein
AT3G59100No related data.
AT3G61420hypothetical protein
AT3G66658No related data.
AT4G04880adenosine/AMP deaminase family protein
AT4G11820No related data.
AT4G12590hypothetical protein
AT4G16970ATP binding / kinase/ protein kinase/ protein serine/threonine kinase
AT4G21800No related data.
AT4G24960No related data.
AT4G26840No related data.
AT4G30890No related data.
AT4G35800No related data.
AT4G36480No related data.
AT4G36800No related data.
AT4G37760No related data.
AT4G38570No related data.
AT4G39220No related data.
AT5G05010clathrin adaptor complexes medium subunit-related
AT5G07340calnexin, putative
AT5G08080No related data.
AT5G10260No related data.
AT5G10480No related data.
AT5G12210geranylgeranyl transferase type II beta subunit, putative / RAB geranylgeranyltransferase beta subunit, putative
AT5G13780GCN5-related N-acetyltransferase, putative
AT5G14530transducin family protein / WD-40 repeat family protein
AT5G17770No related data.
AT5G18280No related data.
AT5G19330armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein
AT5G22840protein kinase family protein
AT5G23630ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase familiy protein
AT5G23670No related data.
AT5G24360No related data.
AT5G25150No related data.
AT5G26680endonuclease, putative
AT5G35730EXS family protein / ERD1/XPR1/SYG1 family protein
AT5G45600No related data.
AT5G46030hypothetical protein
AT5G46750No related data.
AT5G48230No related data.
AT5G52640No related data.
AT5G56030No related data.
AT5G60510undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family protein
AT5G60550No related data.
AT5G61150No related data.
AT5G66020No related data.
AT5G66100La domain-containing protein
AT5G66680No related data.
AT5G66850No related data.
AT1G01230ORMDL family protein

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
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