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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT5G38650  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT5G38650AT5G38650GSP:2 PPI:36proteasome maturation factor UMP1 family protein.
Representative Gene Model Description
AT5G38650.1:proteasome maturation factor UMP1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome maturation factor UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana protein match is: proteasome maturation factor UMP1 family protein (TAIR:AT1G67250.1); Has 161 Blast hits to 161 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 87; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).

Related KEGG pathway    
Genetic Information Processing
   |----------Folding, Sorting and Degradation
   |--------------------ProteasomeLink to keggView overall Pathway
Database cross-references
TAIR Gene: AT5G38650;
IPI: IPI00548696;
UniParc: UPI00000A5B3E;
REFSEQ_PROVISIONAL: NP_198681.1;
KEGG: AT5G38650;

GSPannotationmethodsrelated
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT3G05530No related data.
AT3G22110No related data.
AT3G22630No related data.
AT3G2634020S proteasome beta subunit E, putative
AT3G28030No related data.
AT3G51260No related data.
AT3G52560No related data.
AT3G60820No related data.
AT4G25540No related data.
AT4G31300No related data.
AT4G38630No related data.
AT4G38930ubiquitin fusion degradation UFD1 family protein
AT5G07340calnexin, putative
AT5G2000026S proteasome AAA-ATPase subunit, putative
AT5G40580No related data.
AT5G43010No related data.
AT5G44740No related data.
AT1G09210calreticulin 2 (CRT2)
AT1G12520No related data.
AT1G13060No related data.
AT1G16470No related data.
AT1G21720No related data.
AT1G23260No related data.
AT1G47250No related data.
AT1G53750No related data.
AT1G53850No related data.
AT1G56450No related data.
AT2G2014026S protease regulatory complex subunit 4, putative
AT2G20580No related data.
AT2G27020No related data.
AT2G29570No related data.
AT2G3273026S proteasome regulatory subunit, putative
AT3G02540No related data.
AT1G67250proteasome maturation factor UMP1 family protein

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

TFFamilyConfidenceDetails
ATHB1HD-ZIPLAT3G01470
RAP2.2AP2/EREBPLAT3G14230