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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:KNAT3  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT5G25220KNAT3GSP:42 PPI:49KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3); transcription activator/ transcription factor.
Subcellar localization
nucleus: Pubmed16381842;
Representative Gene Model Description
AT5G25220.1:KNOTTED1-LIKE HOMEOBOX GENE 3 (KNAT3); FUNCTIONS IN: transcription factor activity, transcription activator activity; INVOLVED IN: response to light stimulus, detection of cytokinin stimulus; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 37 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), KNOX1 (InterPro:IPR005540), KNOX2 (InterPro:IPR005541), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNAT4 (KNOTTED1-LIKE HOMEOBOX GENE 4); transcription activator/ transcription factor (TAIR:AT5G11060.1); Has 5188 Blast hits to 5157 proteins in 270 species: Archae - 0; Bacteria - 2; Metazoa - 1871; Fungi - 222; Plants - 2949; Viruses - 4; Other Eukaryotes - 140 (source: NCBI BLink).

AT5G25220.2:KNOTTED1-LIKE HOMEOBOX GENE 3 (KNAT3); FUNCTIONS IN: transcription factor activity, transcription activator activity; INVOLVED IN: response to light stimulus, detection of cytokinin stimulus; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 37 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ELK (InterPro:IPR005539), KNOX1 (InterPro:IPR005540), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), KNOX2 (InterPro:IPR005541), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNAT4 (KNOTTED1-LIKE HOMEOBOX GENE 4); transcription activator/ transcription factor (TAIR:AT5G11060.1); Has 5095 Blast hits to 5064 proteins in 268 species: Archae - 0; Bacteria - 2; Metazoa - 1788; Fungi - 222; Plants - 2945; Viruses - 4; Other Eukaryotes - 134 (source: NCBI BLink).

Phosphorylation info: Phosphoprotein with evidence,detail info please click the following link
Database cross-references
TAIR Gene: AT5G25220;
IPI: IPI00657274; IPI00547240;
UniParc: UPI00005DC120; UPI000012C921;
REFSEQ_PROVISIONAL: NP_197904.1; NP_001031938.1;
KEGG: AT5G25220;

GSPannotationmethodsrelated
AT2G16400(BLH7)BLH7 (bell1-like homeodomain 7); DNA binding / transcription factortext mining 15781858(yeast-2-hybrid assay)
AT1G06920(OFP4)OFP4 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 4)text mining 15781858(yeast-2-hybrid assay)
AT5G02030(RPL)RPL (REPLUMLESS); DNA binding / sequence-specific DNA binding / transcription factortext mining 15781858(yeast-2-hybrid assay)
AT5G11060(KNAT4)KNAT4 (KNOTTED1-LIKE HOMEOBOX GENE 4); transcription activator/ transcription factortext mining 15781858(yeast-2-hybrid assay)
AT1G79960(OFP14)OFP14 (OVATE FAMILY PROTEIN 14)text mining 15781858(yeast-2-hybrid assay)
AT4G34610(BLH6)BLH6 (BELL1-LIKE HOMEODOMAIN 6); DNA binding / transcription factortext mining 15781858(yeast-2-hybrid assay)
AT1G26260(CIB5)CIB5 (CRYPTOCHROME-INTERACTING BASIC-HELIX-LOOP-HELIX 5); DNA binding / transcription factortext mining 15781858(yeast-2-hybrid assay)
AT4G36870(BLH2)BLH2 (BEL1-LIKE HOMEODOMAIN 2); DNA binding / transcription factortext mining 15781858(yeast-2-hybrid assay)
AT2G35940(BLH1)BLH1 (BEL1-LIKE HOMEODOMAIN 1); DNA binding / protein heterodimerization/ protein homodimerization/ transcription factortext mining 15781858(yeast-2-hybrid assay)
AT1G75410(BLH3)BLH3 (BEL1-LIKE HOMEODOMAIN 3); DNA binding / transcription factortext mining 15781858(yeast-2-hybrid assay)
AT2G27220(BLH5)BLH5 (BELL1-like homeodomain 5); DNA binding / transcription factortext mining 15781858(yeast-2-hybrid assay)
AT5G01840(OFP1)OFP1 (OVATE FAMILY PROTEIN 1); protein binding / transcription repressortext mining 15781858(yeast-2-hybrid assay)
AT1G11910aspartyl protease family proteintext mining 15781858(yeast-2-hybrid assay)
AT1G05420(OFP12)OFP12 (OVATE FAMILY PROTEIN 12)text mining 15781858(yeast-2-hybrid assay)
AT2G30400(OFP2)OFP2 (OVATE FAMILY PROTEIN 2)text mining 15781858(yeast-2-hybrid assay)
AT2G23760(BLH4)BLH4 (BEL1-LIKE HOMEODOMAIN 4); DNA binding / transcription factortext mining 15781858(yeast-2-hybrid assay)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G34610(BLH6)BLH6 (BELL1-LIKE HOMEODOMAIN 6); DNA binding / transcription factortext mining 15781858(yeast-2-hybrid)
AT3G17590(BSH)BSH (BUSHY GROWTH); chromatin binding / protein bindingtext mining 23449474(yeast-2-hybrid)
AT2G30400(OFP2)OFP2 (OVATE FAMILY PROTEIN 2)text mining 15781858(yeast-2-hybrid)
AT5G01840(OFP1)OFP1 (OVATE FAMILY PROTEIN 1); protein binding / transcription repressortext mining 15781858(yeast-2-hybrid)
AT2G46020(BRM)transcription regulatory protein SNF2, putativetext mining 23449474(yeast-2-hybrid)
AT2G35940(BLH1)BLH1 (BEL1-LIKE HOMEODOMAIN 1); DNA binding / protein heterodimerization/ protein homodimerization/ transcription factortext mining 15781858(yeast-2-hybrid)
AT1G11910(APA1)No related data.text mining 15781858(yeast-2-hybrid)
AT5G11060(KNAT4)KNAT4 (KNOTTED1-LIKE HOMEOBOX GENE 4); transcription activator/ transcription factortext mining 15781858(yeast-2-hybrid)
AT2G16400(BLH7)BLH7 (bell1-like homeodomain 7); DNA binding / transcription factortext mining 15781858(yeast-2-hybrid)
AT1G75410(BLH3)BLH3 (BEL1-LIKE HOMEODOMAIN 3); DNA binding / transcription factortext mining 15781858(yeast-2-hybrid)
AT2G23760(BLH4)BLH4 (BEL1-LIKE HOMEODOMAIN 4); DNA binding / transcription factortext mining 15781858(yeast-2-hybrid)
AT4G36870(BLH2)BLH2 (BEL1-LIKE HOMEODOMAIN 2); DNA binding / transcription factortext mining 15781858(yeast-2-hybrid)
AT2G27220(BLH5)BLH5 (BELL1-like homeodomain 5); DNA binding / transcription factortext mining 15781858(yeast-2-hybrid)
AT2G28290(SYD)SYD (SPLAYED); ATPase/ chromatin bindingtext mining 23449474(yeast-2-hybrid)
AT1G26260(CIB5)CIB5 (CRYPTOCHROME-INTERACTING BASIC-HELIX-LOOP-HELIX 5); DNA binding / transcription factortext mining 15781858(yeast-2-hybrid)
AT1G06920(OFP4)OFP4 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 4)text mining 15781858(yeast-2-hybrid)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)
AT1G21700(SWI3C)No related data.text mining 23449474(yeast-2-hybrid)
AT2G33610(SWI3B)No related data.text mining 23449474(yeast-2-hybrid)
AT2G41350hypothetical proteintext mining 21798944(yeast-2-hybrid)
AT4G37130hydroxyproline-rich glycoprotein family proteintext mining 23840761(yeast-2-hybrid)
AT1G79960(OFP14)OFP14 (OVATE FAMILY PROTEIN 14)text mining 15781858(yeast-2-hybrid)
AT1G05420(OFP12)OFP12 (OVATE FAMILY PROTEIN 12)text mining 15781858(yeast-2-hybrid)
AT5G02030(RPL)RPL (REPLUMLESS); DNA binding / sequence-specific DNA binding / transcription factortext mining 15781858(yeast-2-hybrid)
AT1G69120(AP1)AP1 (APETALA1); DNA binding / protein binding / protein heterodimerization/ transcription activator/ transcription factortext mining 22238427(Affinity Capture-MS)

 

Predicted
Functional Partners
annotationTotal
AT5G11060No related data.
AT1G23380No related data.
AT1G62990No related data.
AT3G24180catalytic/ glucosylceramidase
AT4G08150No related data.
AT4G16780No related data.
AT4G32040No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

Transcription factorTarget geneDetail infoRelated Artical
SEPALLATA3[AT1G24260]AT5G25220No detail info. 19385720

 

TFFamilyConfidenceDetails
ATHB1HD-ZIPLAT3G01470
TGA1bZIPHAT5G65210