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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:RER1  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT5G22790RER1GSP:2 PPI:2RER1 (RETICULATA-RELATED 1).
Subcellar localization
plastid: Pubmed12775770;
Related organ
cell suspension culture      triton fraction,Schagger 1-DE      Related article
pollen      urea fraction, 1-DE      Related article
silique      detergent fraction,1-DE      Related article
Representative Gene Model Description
AT5G22790.1:RETICULATA-RELATED 1 (RER1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: LCD1 (LOWER CELL DENSITY 1) (TAIR:AT2G37860.3); Has 3747 Blast hits to 1646 proteins in 237 species: Archae - 10; Bacteria - 594; Metazoa - 1288; Fungi - 337; Plants - 546; Viruses - 166; Other Eukaryotes - 806 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT5G22790;
IPI: IPI00548224;
UniParc: UPI00000A4877;
REFSEQ_PROVISIONAL: NP_197671.1;
KEGG: AT5G22790;

GSPannotationmethodsrelated
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)

 


Transcriptional Regulation

TFFamilyConfidenceDetails
AGL3MADSLAT2G03710