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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:MYB43  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT5G16600MYB43GSP:2 PPI:2MYB43 (myb domain protein 43); DNA binding / transcription factor.
Subcellar localization
nucleus: Pubmed12444417;
Representative Gene Model Description
AT5G16600.1:myb domain protein 43 (MYB43); FUNCTIONS IN: transcription factor activity, DNA binding; INVOLVED IN: response to abscisic acid stimulus, regulation of transcription, DNA-dependent, regulation of secondary cell wall thickening; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-type HTH DNA-binding domain (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: MYB20 (myb domain protein 20); DNA binding / transcription factor (TAIR:AT1G66230.1); Has 6120 Blast hits to 5737 proteins in 345 species: Archae - 0; Bacteria - 0; Metazoa - 592; Fungi - 233; Plants - 3828; Viruses - 4; Other Eukaryotes - 1463 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT5G16600;
IPI: IPI00547067;
UniParc: UPI000000BDAB;
REFSEQ_PROVISIONAL: NP_197163.1;
KEGG: AT5G16600;

GSPannotationmethodsrelated
AT3G60600(VAP)VAP (VESICLE ASSOCIATED PROTEIN); protein bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G60600(VAP)VAP (VESICLE ASSOCIATED PROTEIN); protein bindingtext mining 21952135(yeast-2-hybrid)

 


Transcriptional Regulation

Transcription factorTarget geneDetail infoRelated Artical
HY5 [AT5G11260]AT5G16600 Relationship:Repressed Detected Organs:Hypocotyl 17337630

 

TFFamilyConfidenceDetails
AGL1MADSLAT3G58780
ARR10GARPLAT4G31920
ATHB1HD-ZIPLAT3G01470
HY5bZIPLAT5G11260
ID1C2H2(Zn)LAT1G25250
RAV1(2)AP2/EREBPLAT1G13260
TGA1bZIPLAT5G65210