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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:LRR1  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT5G16590LRR1GSP:29 PPI:36LRR1; ATP binding / kinase/ protein serine/threonine kinase.
Subcellar localization
extracellular: Pubmed16287169; plasma membrane: Pubmed14506206;
Related organ
carpel      urea fraction,1-DE      Related article
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      SDS fraction,1-DE      Related article
cell suspension culture      detergent fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
cell suspension culture      triton fraction,Schagger 1-DE      Related article
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
cell suspension culture      SDS fraction,Schagger 1-DE      Related article
cotyledon      SDS fraction,1-DE      Related article
flower      SDS fraction,1-DE      Related article
flower bud      SDS fraction,1-DE      Related article
juvenile leaf      SDS fraction,1-DE      Related article
juvenile leaf      soluble fraction,1-DE      Related article
root      soluble fraction,1-DE      Related article
root      SDS fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
shoot      Phosphopeptide enriched fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Flow through fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchae; IMAC affinity chromatography ng      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
Representative Gene Model Description
AT5G16590.1:LRR1; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation, response to symbiotic fungus; LOCATED IN: plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, core (InterPro:IPR000719), Leucine-rich repeat, N-terminal (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine protein kinase-related (InterPro:IPR017442), Protein kinase-like (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: leucine-rich repeat transmembrane protein kinase, putative (TAIR:AT3G02880.1); Has 93310 Blast hits to 69709 proteins in 2523 species: Archae - 48; Bacteria - 5576; Metazoa - 30626; Fungi - 4456; Plants - 40588; Viruses - 221; Other Eukaryotes - 11795 (source: NCBI BLink).

Phosphorylation info: Phosphoprotein with evidence,detail info please click the following link
Database cross-references
TAIR Gene: AT5G16590;
IPI: IPI00547676;
UniParc: UPI0000048B56;
REFSEQ_PROVISIONAL: NP_197162.1;
KEGG: AT5G16590;

GSPannotationmethodsrelated
AT2G26300(GP_ALPHA_1)GP ALPHA 1 (G PROTEIN ALPHA SUBUNIT 1); GTP binding / GTPase/ channel regulator/ signal transducertext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G31812(ACBP6)ACBP6 (acyl-CoA-binding protein 6); acyl-CoA binding / phosphatidylcholine bindingtext mining 24833385(PCA)
AT5G25930leucine-rich repeat family protein / protein kinase family proteintext mining 21423366(PCA)
AT5G48380(BIR1)No related data.text mining 21423366(PCA)
AT4G27610hypothetical proteintext mining 24833385(PCA)
AT2G26300(GP ALPHA 1)No related data.text mining 21952135(yeast-2-hybrid)
AT5G49540hypothetical proteintext mining 24833385(PCA)
AT3G66654peptidyl-prolyl cis-trans isomerase cyclophilin-type family proteintext mining 24833385(PCA)
AT2G38120(AUX1)AUX1 (AUXIN RESISTANT 1); amino acid transmembrane transporter/ auxin binding / auxin influx transmembrane transporter/ transportertext mining 21423366(PCA)
AT3G11660(NHL1)NHL1text mining 24833385(PCA)
AT2G41705camphor resistance CrcB family proteintext mining 24833385(PCA)
AT1G14700(PAP3)PAP3 (PURPLE ACID PHOSPHATASE 3); acid phosphatase/ protein serine/threonine phosphatasetext mining 24833385(PCA)
AT4G30850(HHP2)HHP2 (HEPTAHELICAL TRANSMEMBRANE PROTEIN2); receptortext mining 24833385(PCA)
AT1G69970(CLE26)CLE26 (CLAVATA3/ESR-RELATED 26); protein binding / receptor bindingtext mining 21423366(PCA)
AT2G22425peptidasetext mining 24833385(PCA)
AT4G20790leucine-rich repeat family proteintext mining 24833385(PCA)
AT3G17000(UBC32)UBC32 (ubiquitin-conjugating enzyme 32); ubiquitin-protein ligasetext mining 24833385(PCA)
AT1G57870(SK42)No related data.text mining 24833385(PCA)
AT3G12180cornichon family proteintext mining 24833385(PCA)
AT1G29060hypothetical proteintext mining 24833385(PCA)
AT5G59650leucine-rich repeat protein kinase, putativetext mining 24833385(PCA)
AT5G49890(CLC-C)CLC-C (CHLORIDE CHANNEL C); anion channel/ voltage-gated chloride channeltext mining 24833385(PCA)
AT2G28180(ATCHX8)ATCHX8; monovalent cation:proton antiporter/ sodium:hydrogen antiportertext mining 21423366(PCA)
AT3G44930(CHX10)No related data.text mining 21423366(PCA)
AT1G34640hypothetical proteintext mining 24833385(PCA)
AT1G65690harpin-induced protein-related / HIN1-related / harpin-responsive protein-relatedtext mining 24833385(PCA)
AT3G28040leucine-rich repeat transmembrane protein kinase, putativetext mining 21423366(PCA)
AT5G56040leucine-rich repeat protein kinase, putativetext mining 21423366(PCA)
AT1G08770(PRA1.E)PRA1.E (PRENYLATED RAB ACCEPTOR 1.E)text mining 24833385(PCA)

 

Predicted
Functional Partners
annotationTotal
AT4G28670protein kinase family protein
AT1G11050protein kinase family protein
AT2G21470No related data.
AT1G71830No related data.
AT5G27950kinesin motor protein-related
AT2G36980pentatricopeptide (PPR) repeat-containing protein
AT2G26730leucine-rich repeat transmembrane protein kinase, putative

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

TFFamilyConfidenceDetails
AGMADSLAT4G18960
AGL3MADSLAT2G03710
ARR10GARPLAT4G31920
ATHB1HD-ZIPHAT3G01470
RAP2.2AP2/EREBPLAT3G14230