Home Contact Sitemap

AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:GUN5  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT5G13630GUN5GSP:14 PPI:14GUN5 (GENOMES UNCOUPLED 5); magnesium chelatase.
Subcellar localization
mitochondrion: Pubmed14671022; plastid: Pubmed12444417;
Related organ
carpel      detergent fraction,1-DE      Related article
carpel      urea fraction,1-DE      Related article
carpel      soluble fraction,1-DE      Related article
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      SDS fraction,1-DE      Related article
cell suspension culture      detergent fraction,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
cotyledon      SDS fraction,1-DE      Related article
cotyledon      soluble fraction,1-DE      Related article
flower      SDS fraction,1-DE      Related article
flower      soluble fraction,1-DE      Related article
flower bud      SDS fraction,1-DE      Related article
flower bud      soluble fraction,1-DE      Related article
juvenile leaf      SDS fraction,1-DE      Related article
juvenile leaf      soluble fraction,1-DE      Related article
root      SDS fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      soluble fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
shoot      Flow through fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Flow through fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchae; IMAC affinity chromatography ng      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
Representative Gene Model Description
AT5G13630.1:GENOMES UNCOUPLED 5 (GUN5); FUNCTIONS IN: magnesium chelatase activity; INVOLVED IN: chlorophyll biosynthetic process, biosynthetic process; LOCATED IN: mitochondrion, magnesium chelatase complex, chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CobN/magnesium chelatase (InterPro:IPR003672), Magnesium-chelatase, subunit H (InterPro:IPR011771); Has 3082 Blast hits to 2714 proteins in 402 species: Archae - 203; Bacteria - 1255; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 1568 (source: NCBI BLink).

AT5G13630.2:GENOMES UNCOUPLED 5 (GUN5); FUNCTIONS IN: magnesium chelatase activity; INVOLVED IN: chlorophyll biosynthetic process, biosynthetic process; LOCATED IN: mitochondrion, magnesium chelatase complex, chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CobN/magnesium chelatase (InterPro:IPR003672), Magnesium-chelatase, subunit H (InterPro:IPR011771); Has 2875 Blast hits to 2507 proteins in 401 species: Archae - 201; Bacteria - 1237; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 1381 (source: NCBI BLink).

Related KEGG pathway    
Metabolic Pathways
   |----------Metabolism of Cofactors and Vitamins
   |--------------------Porphyrin and chlorophyll metabolismLink to keggView overall Pathway
Related Mutant  
M1648 Related gene:AT5G13630;
Method:NULL
Phenotype:gun4 and gun5 have lower chlorophyll levels than wild type, but gun1 mutants accumulate normal levels of chlorophyll (Figs. 2 and 3).Additionally, gun1gun4 and gun1gun5 accumulate the same levels of chlorophyll as gun4 and gun5 single mutants, respectively (Figs. 2 and 3).(PMID: 11172074 )gun5 has a weak chlorophyll phenotype (Figs.2 and 3)(PMID: 11172074 )
Related PO:chlorenchyma  PO:0005426          
Related Datasource Link:

M1649 Related gene:GUN1; AT5G13630;
Method:NULL
Phenotype:gun4 and gun5 have lower chlorophyll levels than wild type, but gun1 mutants accumulate normal levels of chlorophyll (Figs. 2 and 3).Additionally, gun1gun4 and gun1gun5 accumulate the same levels of chlorophyll as gun4 and gun5 single mutants, respectively (Figs. 2 and 3).(PMID: 11172074 )
Related PO:chlorenchyma  PO:0005426          
Related Datasource Link:

    M5376 Related gene:AT5G13630;
    Method:NULL
    Phenotype:rtl1 mutant allele of the CHLH gene in Arabidopsis thaliana showed ABA insensitive phenotypes in both stomatal movement and seed germination.(PMID: 23011401)| Upregulation of CHLI1 resulted in ABA hypersensitivity in seed germination, while downregulation of CHLI conferred ABA insensitivity in stomatal response in Arabidopsis.(PMID: 23011401)| the rtl1 mutant has wildtype response to ABA in early seedling growth, in stomatal movement. while cch mutant showed significant ABA insensitive phenotype in early seedling growth (Fig. 3b, c), the rtl1 mutant is insensitive to ABA.(PMID: 23011401)
    Related PO:stomatal complex  PO:0002000|seed    
    Related Datasource Link:

    M5396 Related gene:AT5G13630;
    Method:NULL
    Phenotype:CHLH-GFP transgenic plants in which the CER6 promoter drives the CHLH-GFP exhibited a closed-stomata phenotype under light conditions (Figures 3C,D), and drought tolerance, probably via increased sensitivity to ABA (Figures 3E,F).
    Related PO:chlorenchyma  PO:0005426    
    Related Datasource Link:
    *

    Predicted Mutant Phenotypes
    seedling development stage    PO:0007131;    seedling  PO:0008037;    
    Database cross-references
    Entrez Gene: c;
    TAIR Gene: AT5G13630;
    IPI: c;
    UniProtKB/TrEMBL: c;
    UniParc: c;
    REFSEQ_PROVISIONAL: c;
    KEGG: AT5G13630;

    GSPannotationmethodsrelated
    AT1G63440(HMA5)HMA5 (HEAVY METAL ATPASE 5); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanismtext mining 16367966(yeast-2-hybrid assay)
    AT1G08520(CHLD)CHLD; ATP binding / magnesium chelatase/ nucleoside-triphosphatase/ nucleotide bindingtext mining 16953878(NULL)
    AT3G06510(SFR2)SFR2 (SENSITIVE TO FREEZING 2); beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compoundstext mining 16778081(NULL)
    AT3G59400(GUN4)GUN4; enzyme binding / tetrapyrrole bindingtext mining 12574634(immunoprecipitation)
    AT2G16780(MSI2)MSI2 (MULTICOPY SUPPRESSOR OF IRA1 2)text mining 16778081(NULL)
    AT4G17730(SYP23)SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
    AT1G80840(WRKY40)WRKY40; transcription factortext mining 20543028(Affinity Capture-Western)
    AT2G25000(WRKY60)WRKY60; transcription factortext mining 20543028(yeast-2-hybrid)
    AT1G80840(WRKY40)WRKY40; transcription factortext mining 20543028(PCA)
    AT5G20720(CPN20)CPN20 (CHAPERONIN 20); calmodulin bindingtext mining 23783410(PCA)
    AT4G17730(SYP23)SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptortext mining 21952135(yeast-2-hybrid)
    AT4G31800(WRKY18)WRKY18; transcription factortext mining 20543028(yeast-2-hybrid)
    AT1G08520(PDE166)No related data.EC
    AT4G18480(CHLI1)CHLI1; ATPase/ magnesium chelataseEC

     


    Transcriptional Regulation

    Transcription factorTarget geneDetail infoRelated Artical
    SEPALLATA3[AT1G24260]AT5G13630No detail info. 19385720
    HY5 [AT5G11260]AT5G13630 Relationship:Induced Detected Organs:Hypocotyl 17337630
    HY5 [AT5G11260]AT5G13630 Relationship:Induced Detected Organs:Root 17337630

     

    TFFamilyConfidenceDetails
    AGL1MADSLAT3G58780
    ARR10GARPLAT4G31920
    ID1C2H2(Zn)LAT1G25250
    RAV1(2)AP2/EREBPHAT1G13260
    TGA1bZIPHAT5G65210