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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT5G13450  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT5G13450AT5G13450GSP:4 PPI:68ATP synthase delta chain, mitochondrial, putative / H(+)-transporting two-sector ATPase, delta (OSCP) subunit, putative.
Subcellar localization
chloroplast    Based on Chloroplast Proteomics data;
Related organ
carpel      detergent fraction,1-DE      Related article
carpel      urea fraction,1-DE      Related article
carpel      soluble fraction,1-DE      Related article
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      SDS fraction,1-DE      Related article
cell suspension culture      detergent fraction,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
cell suspension culture      triton fraction,Schagger 1-DE      Related article
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
cell suspension culture      SDS fraction,Schagger 1-DE      Related article
cotyledon      SDS fraction,1-DE      Related article
cotyledon      soluble fraction,1-DE      Related article
flower      SDS fraction,1-DE      Related article
flower      soluble fraction,1-DE      Related article
flower bud      SDS fraction,1-DE      Related article
juvenile leaf      SDS fraction,1-DE      Related article
juvenile leaf      soluble fraction,1-DE      Related article
pollen      combined fractions, 1-DE      Related article
pollen      soluble fraction, 1-DE      Related article
pollen      urea fraction, 1-DE      Related article
pollen      cyclohexane fraction, 1-DE      Related article
pollen      detergent fraction, 1-DE      Related article
pollen      urea total extract, 1-DE      Related article
pollen      total extract, ICAT labelling, avidin affinity enriched      Related article
pollen      total extract, ICAT labelling, avidin affinity flow through      Related article
root      soluble fraction,1-DE      Related article
root      SDS fraction,1-DE      Related article
seed      detergent fraction,1-DE      Related article
seed      urea fraction,1-DE      Related article
seed      soluble fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      soluble fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
shoot      Phosphopeptide enriched fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Flow through fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Flow through fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchae; IMAC affinity chromatography ng      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
Related complex
F-type ATPase (Eukaryotes
Representative Gene Model Description
AT5G13450.1:ATP synthase delta chain, mitochondrial, putative / H(+)-transporting two-sector ATPase, delta (OSCP) subunit, putative; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: mitochondrion, chloroplast, plasma membrane, membrane, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, OSCP/delta subunit (InterPro:IPR000711); BEST Arabidopsis thaliana protein match is: ATPD (ATP SYNTHASE DELTA-SUBUNIT GENE); hydrogen ion transporting ATP synthase, rotational mechanism / proton-transporting ATPase, rotational mechanism (TAIR:AT4G09650.1); Has 3881 Blast hits to 3881 proteins in 1167 species: Archae - 0; Bacteria - 1909; Metazoa - 184; Fungi - 93; Plants - 120; Viruses - 0; Other Eukaryotes - 1575 (source: NCBI BLink).

AT5G13450.2:ATP synthase delta chain, mitochondrial, putative / H(+)-transporting two-sector ATPase, delta (OSCP) subunit, putative; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: mitochondrion, chloroplast, plasma membrane, membrane, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, OSCP/delta subunit (InterPro:IPR000711); Has 3531 Blast hits to 3531 proteins in 1079 species: Archae - 0; Bacteria - 1753; Metazoa - 181; Fungi - 90; Plants - 114; Viruses - 0; Other Eukaryotes - 1393 (source: NCBI BLink).

Related KEGG pathway    
Metabolic Pathways
   |----------Energy Metabolism
   |--------------------Oxidative phosphorylationLink to keggView overall Pathway
Database cross-references
TAIR Gene: AT5G13450;
IPI: IPI00656721; IPI00538064;
UniParc: UPI00005DC0FA; UPI00001265E5;
REFSEQ_PROVISIONAL: NP_196849.1; NP_001031875.1;
KEGG: AT5G13450;

GSPannotationmethodsrelated
AT5G47030ATP synthase delta' chain, mitochondrialtext mining 12681508(biochemical)
AT3G59220(PRN)PRN (PIRIN); calmodulin bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G59220(PRN)PRN (PIRIN); calmodulin bindingtext mining 21952135(yeast-2-hybrid)
AT4G09000(GRF1)14-3-3-like protein GF14 chi / general regulatory factor 1 (GRF1)text mining 21094157(Affinity Capture-MS)

 

Predicted
Functional Partners
annotationTotal
AT4G14000hypothetical protein
AT4G24190No related data.
AT4G26970aconitate hydratase/ copper ion binding
AT4G28060cytochrome c oxidase subunit 6b, putative
AT4G36480No related data.
AT4G37760No related data.
AT4G37930No related data.
AT4G39220No related data.
AT5G01320pyruvate decarboxylase, putative
AT5G04770No related data.
AT5G05730No related data.
AT5G08670ATP binding / hydrogen ion transporting ATP synthase, rotational mechanism
AT5G08680ATP synthase beta chain, mitochondrial, putative
AT5G10960CCR4-NOT transcription complex protein, putative
AT5G13430ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative
AT5G13440ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative
AT5G13710No related data.
AT5G15090No related data.
AT5G2354026S proteasome regulatory subunit, putative
AT5G40610glycerol-3-phosphate dehydrogenase (NAD+) / GPDH
AT5G40810cytochrome c1, putative
AT5G42570hypothetical protein
AT5G50850No related data.
AT5G52640No related data.
AT5G56030No related data.
AT5G57490No related data.
AT5G62050No related data.
AT5G66680No related data.
ATMG00220No related data.
ATMG00410No related data.
ATMG01080No related data.
ATMG01190No related data.
AT1G07510No related data.
AT1G10130No related data.
AT1G15710prephenate dehydrogenase family protein
AT1G19910No related data.
AT1G22150No related data.
AT1G32340No related data.
AT1G51980mitochondrial processing peptidase alpha subunit, putative
AT1G7405060S ribosomal protein L6 (RPL6C)
AT1G76030vacuolar ATP synthase subunit B / V-ATPase B subunit / vacuolar proton pump B subunit / V-ATPase 57 kDa subunit
AT2G05710aconitate hydratase, cytoplasmic, putative / citrate hydro-lyase/aconitase, putative
AT2G07727cytochrome b (MTCYB) (COB) (CYTB)
AT2G14120No related data.
AT2G25610H+-transporting two-sector ATPase, C subunit family protein
AT2G26140No related data.
AT2G26980No related data.
AT2G33040ATP synthase gamma chain, mitochondrial (ATPC)
AT2G39630glycosyl transferase family 2 protein
AT2G46470No related data.
AT3G02090No related data.
AT3G06460GNS1/SUR4 membrane family protein
AT3G11397No related data.
AT3G17820No related data.
AT3G19420No related data.
AT3G19820No related data.
AT3G22110No related data.
AT3G29200No related data.
AT3G47520No related data.
AT3G47930No related data.
AT3G52300No related data.
AT3G52730ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein
AT3G57090No related data.
AT3G58490phosphatidic acid phosphatase family protein / PAP2 family protein

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
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Transcriptional Regulation

TFFamilyConfidenceDetails
RAV1(2)AP2/EREBPLAT1G13260