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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT5G13430  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT5G13430AT5G13430GSP:7 PPI:81ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative.
Subcellar localization
mitochondrion: Pubmed12444417;
Related organ
carpel      detergent fraction,1-DE      Related article
carpel      urea fraction,1-DE      Related article
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      SDS fraction,1-DE      Related article
cell suspension culture      detergent fraction,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
cell suspension culture      triton fraction,Schagger 1-DE      Related article
cell suspension culture      SDS fraction,Schagger 1-DE      Related article
cotyledon      SDS fraction,1-DE      Related article
flower      SDS fraction,1-DE      Related article
flower bud      SDS fraction,1-DE      Related article
root      SDS fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
Related complex
Complex III (Cytochrome bc1 complex
Complex III (Cytochrome bc1 complex
Representative Gene Model Description
AT5G13430.1:ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative; FUNCTIONS IN: metal ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III, membrane; EXPRESSED IN: male gametophyte, guard cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquinol-cytochrome c reductase, iron-sulphur subunit (InterPro:IPR006317), Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Rieske [2Fe-2S] region (InterPro:IPR005806), Rieske iron-sulphur protein (InterPro:IPR014349), Ubiquinol cytochrome reductase transmembrane region (InterPro:IPR004192); BEST Arabidopsis thaliana protein match is: ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative (TAIR:AT5G13440.1); Has 3940 Blast hits to 3940 proteins in 823 species: Archae - 4; Bacteria - 1411; Metazoa - 206; Fungi - 100; Plants - 334; Viruses - 0; Other Eukaryotes - 1885 (source: NCBI BLink).

Related KEGG pathway    
Metabolic Pathways
   |----------Energy Metabolism
   |--------------------Oxidative phosphorylationLink to keggView overall Pathway
Database cross-references
TAIR Gene: AT5G13430;
IPI: IPI00535798;
UniParc: UPI000009CF8F;
REFSEQ_PROVISIONAL: NP_568288.1;
KEGG: AT5G13430;

GSPannotationmethodsrelated
AT3G16890(PPR40)PPR40 (PENTATRICOPEPTIDE (PPR) DOMAIN PROTEIN 40)text mining 18305213(co-fractionation)
AT2G26300(GP_ALPHA_1)GP ALPHA 1 (G PROTEIN ALPHA SUBUNIT 1); GTP binding / GTPase/ channel regulator/ signal transducertext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G13640(UNE16)UNE16 (unfertilized embryo sac 16); transcription factortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G03240(UBQ3)UBQ3 (POLYUBIQUITIN 3); protein bindingtext mining 23667124(Affinity Capture-MS)
AT3G16890(PPR40)PPR40 (PENTATRICOPEPTIDE (PPR) DOMAIN PROTEIN 40)text mining 18305213(Co-fractionation)
AT2G26300(GP ALPHA 1)No related data.text mining 21952135(yeast-2-hybrid)
AT4G13640(UNE16)UNE16 (unfertilized embryo sac 16); transcription factortext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT4G32910hypothetical protein
AT4G28390No related data.
AT4G27640importin beta-2 subunit family protein
AT4G25880No related data.
AT4G24520No related data.
AT4G13720inosine triphosphate pyrophosphatase, putative / HAM1 family protein
AT4G10040No related data.
AT4G00660DEAD/DEAH box helicase, putative
AT3G63130No related data.
AT3G58510DEAD box RNA helicase, putative (RH11)
AT3G54610No related data.
AT3G52730ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein
AT3G50940AAA-type ATPase family protein
AT3G49010No related data.
AT3G30775No related data.
AT3G29200No related data.
AT3G25230No related data.
AT3G19770No related data.
ATMG00220No related data.
AT5G66760No related data.
AT5G66100La domain-containing protein
AT5G62600transportin-SR-related
AT5G56290No related data.
AT5G42020No related data.
AT5G40810cytochrome c1, putative
AT5G2029040S ribosomal protein S8 (RPS8A)
AT5G19760dicarboxylate/tricarboxylate carrier (DTC)
AT5G19320No related data.
AT5G13570No related data.
AT5G13490No related data.
AT5G13450ATP synthase delta chain, mitochondrial, putative / H(+)-transporting two-sector ATPase, delta (OSCP) subunit, putative
AT5G10960CCR4-NOT transcription complex protein, putative
AT5G09470mitochondrial substrate carrier family protein
AT5G06290No related data.
AT4G37830cytochrome c oxidase-related
AT4G37130hydroxyproline-rich glycoprotein family protein
AT4G34110No related data.
AT2G07727cytochrome b (MTCYB) (COB) (CYTB)
AT1G80680No related data.
AT1G80670transducin family protein / WD-40 repeat family protein
AT1G79090hypothetical protein
AT1G78870No related data.
AT1G75200flavodoxin family protein / radical SAM domain-containing protein
AT1G62850translation release factor
AT1G55900No related data.
AT1G51980mitochondrial processing peptidase alpha subunit, putative
AT1G50920GTP-binding protein-related
AT1G23260No related data.
AT1G22840No related data.
AT1G20350No related data.
AT1G17530No related data.
AT1G17160pfkB-type carbohydrate kinase family protein
AT1G16220protein phosphatase 2C family protein / PP2C family protein
AT1G13560No related data.
AT1G13120No related data.
AT3G17910No related data.
AT3G17810dihydroorotate dehydrogenase family protein / dihydroorotate oxidase family protein
AT3G14010No related data.
AT3G12580No related data.
AT3G12110No related data.
AT3G05040No related data.
AT3G04460No related data.
AT3G03490No related data.
AT3G03420Ku70-binding family protein
AT3G02280flavodoxin family protein
AT3G02090No related data.
AT2G47510No related data.
AT2G43560immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein
AT2G39800No related data.
AT2G29080No related data.
AT2G26350No related data.
AT2G26140No related data.
AT2G16960importin beta-2 subunit family protein
AT2G15790No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
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