AtPID
Arabidopsis thaliana Protein Interactome Database
Search Results
Query protein:AT5G13190 Network Display| Locus | Symbol | Number of interactions | Annotation | ||||||||||||
| AT5G13190 | AT5G13190 | GSP:4 PPI:4 | hypothetical protein. | ||||||||||||
| Representative Gene Model Description AT5G13190.1:INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: LPS-induced tumor necrosis factor alpha factor (InterPro:IPR006629); Has 21 Blast hits to 21 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | |||||||||||||||
| Database cross-references TAIR Gene: AT5G13190; IPI: IPI00526544; UniParc: UPI00000A6D9C; REFSEQ_PROVISIONAL: NP_568286.1; KEGG: AT5G13190; | |||||||||||||||
| GSP | annotation | methods | related |
| AT4G17730(SYP23) | SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptor | text mining | 21036873(yeast-2-hybrid assay:FDS1176001) |
| AT4G20380 | zinc finger protein (LSD1) | text mining | 21526181(yeast-2-hybrid) |
| AT4G17730(SYP23) | SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptor | text mining | 21952135(yeast-2-hybrid) |
| AT4G20380 | zinc finger protein (LSD1) | text mining | 21526181(Reconstituted Complex) |
| Transcriptional Regulation |
| TF | Family | Confidence | Details | ||||||||||||
| ARR1 | GARP/ARR-B | L | AT3G16857 | ||||||||||||
| ATHB1 | HD-ZIP | L | AT3G01470 | ||||||||||||
| ATHB5 | HD-ZIP | H | AT5G65310 | ||||||||||||
| RAP2.2 | AP2/EREBP | H | AT3G14230 | ||||||||||||
| RAV1(2) | AP2/EREBP | H | AT1G13260 | ||||||||||||
| TGA1 | bZIP | H | AT5G65210 |