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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT5G13190  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT5G13190AT5G13190GSP:4 PPI:4hypothetical protein.
Representative Gene Model Description
AT5G13190.1:INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: LPS-induced tumor necrosis factor alpha factor (InterPro:IPR006629); Has 21 Blast hits to 21 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT5G13190;
IPI: IPI00526544;
UniParc: UPI00000A6D9C;
REFSEQ_PROVISIONAL: NP_568286.1;
KEGG: AT5G13190;

GSPannotationmethodsrelated
AT4G17730(SYP23)SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G20380zinc finger protein (LSD1)text mining 21526181(yeast-2-hybrid)
AT4G17730(SYP23)SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptortext mining 21952135(yeast-2-hybrid)
AT4G20380zinc finger protein (LSD1)text mining 21526181(Reconstituted Complex)

 


Transcriptional Regulation

TFFamilyConfidenceDetails
ARR1GARP/ARR-BLAT3G16857
ATHB1HD-ZIPLAT3G01470
ATHB5HD-ZIPHAT5G65310
RAP2.2AP2/EREBPHAT3G14230
RAV1(2)AP2/EREBPHAT1G13260
TGA1bZIPHAT5G65210