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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT5G11790  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT5G11790AT5G11790GSP:3 PPI:4Ndr family protein.
Representative Gene Model Description
AT5G11790.1:Ndr family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell differentiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pollen specific protein SF21 (InterPro:IPR015511), Ndr (InterPro:IPR004142); BEST Arabidopsis thaliana protein match is: Ndr family protein (TAIR:AT5G56750.1); Has 689 Blast hits to 689 proteins in 89 species: Archae - 0; Bacteria - 44; Metazoa - 480; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).

Predicted Mutant Phenotypes
phloem    PO:0005417;    
Database cross-references
TAIR Gene: AT5G11790;
IPI: IPI00537398;
UniParc: UPI00000A24AD;
REFSEQ_PROVISIONAL: NP_568251.1;
KEGG: AT5G11790;

GSPannotationmethodsrelated
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G68185ubiquitin-relatedtext mining 20855607(yeast-2-hybrid)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT2G19620Ndr family protein

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

TFFamilyConfidenceDetails
ATHB1HD-ZIPLAT3G01470
RAV1(2)AP2/EREBPLAT1G13260