AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:EMB3010 Network Display

Locus

Symbol

Number of interactions

Annotation

AT5G10360

EMB3010

GSP:8 PPI:9

EMB3010 (embryo defective 3010); structural constituent of ribosome.

Subcellar localization
plasma membrane: Pubmed17317660;

Related organ
carpel      detergent fraction,1-DE      Related article
carpel      urea fraction,1-DE      Related article
carpel      soluble fraction,1-DE      Related article
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      SDS fraction,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
cell suspension culture      SDS fraction,Schagger 1-DE      Related article
cotyledon      SDS fraction,1-DE      Related article
flower      SDS fraction,1-DE      Related article
flower bud      SDS fraction,1-DE      Related article
pollen      combined fractions, 1-DE      Related article
pollen      soluble fraction, 1-DE      Related article
pollen      urea fraction, 1-DE      Related article
pollen      cyclohexane fraction, 1-DE      Related article
pollen      urea total extract, 1-DE      Related article
pollen      total extract, ICAT labelling, avidin affinity flow through      Related article
root      SDS fraction,1-DE      Related article
seed      detergent fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      soluble fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
shoot      Phosphopeptide enriched fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Phosphopeptide enriched fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Flow through fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Flow through fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Phosphopeptide enriched fraction: SDS total extract of A. thaliana shoots; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchae; IMAC affinity chromatography ng      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article

Related complex
Ribosome, archaea
Ribosome, eukaryotes

Representative Gene Model Description
AT5G10360.1:embryo defective 3010 (EMB3010); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: embryonic development ending in seed dormancy, translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S6e (InterPro:IPR001377), Ribosomal protein S6, eukaryotic (InterPro:IPR014401), Ribosomal protein S6e, conserved site (InterPro:IPR018282); BEST Arabidopsis thaliana protein match is: RPS6 (RIBOSOMAL PROTEIN S6); structural constituent of ribosome (TAIR:AT4G31700.1); Has 832 Blast hits to 830 proteins in 304 species: Archae - 152; Bacteria - 0; Metazoa - 342; Fungi - 112; Plants - 80; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink).

Phosphorylation info: Phosphoprotein with evidence,detail info please click the following link

Related KEGG pathway
Genetic Information Processing
\|----------Translation
\|--------------------Ribosome	Link to kegg	View overall Pathway

Related Mutant
	M4459 Related gene:AT5G10360; Method:T-DNA Insertion_Mutant,mutation site Exon 5 Phenotype:Embryo Defective,Preglobular Related PO:embryo PO:0009009 Related Datasource Link:SeedGenes Database

Database cross-references
TAIR Gene: AT5G10360;
KEGG: AT5G10360;

GSP	annotation	methods	related
AT5G65210(TGA1)	TGA1; DNA binding / calmodulin binding / transcription factor	text mining	21036873(yeast-2-hybrid assay:FDS1176001)
AT5G46630	clathrin adaptor complexes medium subunit family protein	text mining	23975897(Affinity Capture-MS)
AT4G26110(NAP1;1)	NAP1;1 (NUCLEOSOME ASSEMBLY PROTEIN1;1); DNA binding	text mining	21798944(yeast-2-hybrid)
AT5G04200(MC9)	No related data.	text mining	23964026(Biochemical Activity)
AT5G65210(TGA1)	TGA1; DNA binding / calmodulin binding / transcription factor	text mining	21952135(yeast-2-hybrid)
AT4G29040(RPT2a)	RPT2a (regulatory particle AAA-ATPase 2a); ATPase	text mining	24846764(Affinity Capture-MS)
AT5G56950(NAP1;3)	NAP1;3 (NUCLEOSOME ASSEMBLY PROTEIN 1;3); DNA binding	text mining	21798944(yeast-2-hybrid)
AT3G24350(SYP32)	SYP32 (SYNTAXIN OF PLANTS 32); SNAP receptor	text mining	24556609(Affinity Capture-MS)