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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AtPPa6  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT5G09650AtPPa6GSP:3 PPI:115AtPPa6 (Arabidopsis thaliana pyrophosphorylase 6); inorganic diphosphatase/ pyrophosphatase.
Subcellar localization
plastid: Pubmed12938931; cytosol: Pubmed12444417; plasma membrane: Pubmed12444417;
Related organ
carpel      detergent fraction,1-DE      Related article
carpel      urea fraction,1-DE      Related article
carpel      soluble fraction,1-DE      Related article
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      detergent fraction,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
cell suspension culture      triton fraction,Schagger 1-DE      Related article
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
cell suspension culture      SDS fraction,Schagger 1-DE      Related article
cotyledon      SDS fraction,1-DE      Related article
cotyledon      soluble fraction,1-DE      Related article
flower      soluble fraction,1-DE      Related article
flower bud      SDS fraction,1-DE      Related article
flower bud      soluble fraction,1-DE      Related article
juvenile leaf      SDS fraction,1-DE      Related article
juvenile leaf      soluble fraction,1-DE      Related article
pollen      soluble fraction, 1-DE      Related article
pollen      urea total extract, 1-DE      Related article
pollen      total extract, ICAT labelling, avidin affinity flow through      Related article
root      soluble fraction,1-DE      Related article
root      SDS fraction,1-DE      Related article
seed      detergent fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      soluble fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
shoot      Phosphopeptide enriched fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Flow through fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Flow through fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchae; IMAC affinity chromatography ng      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
Representative Gene Model Description
AT5G09650.1:Arabidopsis thaliana pyrophosphorylase 6 (AtPPa6); FUNCTIONS IN: inorganic diphosphatase activity, pyrophosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, chloroplast, chloroplast stroma, membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162); BEST Arabidopsis thaliana protein match is: AtPPa5 (Arabidopsis thaliana pyrophosphorylase 5); inorganic diphosphatase/ pyrophosphatase (TAIR:AT4G01480.1); Has 3323 Blast hits to 3322 proteins in 843 species: Archae - 105; Bacteria - 2125; Metazoa - 208; Fungi - 214; Plants - 181; Viruses - 0; Other Eukaryotes - 490 (source: NCBI BLink).

Predicted Mutant Phenotypes
seed    PO:0009010;    
Database cross-references
TAIR Gene: AT5G09650;
IPI: IPI00524195;
UniParc: UPI00000AA019;
REFSEQ_PROVISIONAL: NP_196527.1;
KEGG: AT5G09650;

GSPannotationmethodsrelated
AT3G18130(RACK1C_AT)RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C); nucleotide bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G48880F-box family proteintext mining 21798944(yeast-2-hybrid)
AT3G18130(RACK1C_AT)RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C); nucleotide bindingtext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT1G02130No related data.
AT1G02930No related data.
AT1G0448060S ribosomal protein L23 (RPL23A)
AT1G09640elongation factor 1B-gamma, putative / eEF-1B gamma, putative
AT1G11680No related data.
AT1G11890No related data.
AT1G11980No related data.
AT1G14610No related data.
AT1G16220protein phosphatase 2C family protein / PP2C family protein
AT1G18260suppressor of lin-12-like protein-related / sel-1 protein-related
AT1G19910No related data.
AT1G19920No related data.
AT1G22300No related data.
AT1G31812No related data.
AT1G43170No related data.
AT1G49910WD-40 repeat family protein / mitotic checkpoint protein, putative
AT1G53850No related data.
AT1G54220dihydrolipoamide S-acetyltransferase, putative
AT1G55250No related data.
AT1G56070No related data.
AT1G57720elongation factor 1B-gamma, putative / eEF-1B gamma, putative
AT1G60430No related data.
AT1G70590F-box family protein
AT1G70730phosphoglucomutase, cytoplasmic, putative / glucose phosphomutase, putative
AT1G74030enolase, putative
AT1G75560zinc knuckle (CCHC-type) family protein
AT1G7794060S ribosomal protein L30 (RPL30B)
AT1G79930No related data.
AT2G0439040S ribosomal protein S17 (RPS17A)
AT2G17190ubiquitin family protein
AT2G18020No related data.
AT2G20360binding / catalytic/ coenzyme binding
AT2G21250mannose 6-phosphate reductase (NADPH-dependent), putative
AT2G25610H+-transporting two-sector ATPase, C subunit family protein
AT2G25830YebC-related
AT2G29450No related data.
AT2G3337060S ribosomal protein L23 (RPL23B)
AT2G35040AICARFT/IMPCHase bienzyme family protein
AT2G36530No related data.
AT2G39770No related data.
AT2G39800No related data.
AT2G44950No related data.
AT2G45630oxidoreductase family protein
AT3G01790ribosomal protein L13 family protein
AT3G02540No related data.
AT3G02820zinc knuckle (CCHC-type) family protein
AT3G04400No related data.
AT3G05590No related data.
AT3G06400No related data.
AT3G0963060S ribosomal protein L4/L1 (RPL4A)
AT3G09640No related data.
AT3G10850No related data.
AT3G1151040S ribosomal protein S14 (RPS14B)
AT3G12530No related data.
AT3G12670No related data.
AT3G13930dihydrolipoamide S-acetyltransferase, putative
AT3G18600DEAD/DEAH box helicase, putative
AT3G2483060S ribosomal protein L13A (RPL13aB)
AT3G25800No related data.
AT3G27380No related data.
AT3G43810No related data.
AT3G49010No related data.
AT3G50360No related data.
AT3G54840No related data.
AT3G59630diphthamide synthesis DPH2 family protein
AT3G62310RNA helicase, putative
AT4G02620vacuolar ATPase subunit F family protein
AT4G08870arginase, putative
AT4G11820No related data.
AT4G13780methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative
AT4G16420No related data.
AT4G20360No related data.
AT4G23900nucleoside diphosphate kinase 4 (NDK4)
AT4G26840No related data.
AT4G30890No related data.
AT4G32720No related data.
AT4G34740No related data.
AT4G36020No related data.
AT4G37910No related data.
AT4G38130No related data.
AT4G39800No related data.
AT5G02790In2-1 protein, putative
AT5G03860No related data.
AT5G0480040S ribosomal protein S17 (RPS17D)
AT5G05730No related data.
AT5G05920No related data.
AT5G0709040S ribosomal protein S4 (RPS4B)
AT5G09590No related data.
AT5G10270No related data.
AT5G14800No related data.
AT5G2785060S ribosomal protein L18 (RPL18C)
AT5G36880acetyl-CoA synthetase, putative / acetate-CoA ligase, putative
AT5G39740No related data.
AT5G40650No related data.
AT5G41370No related data.
AT5G42020No related data.
AT5G43430No related data.
AT5G48580No related data.
AT5G4876060S ribosomal protein L13A (RPL13aD)
AT5G54910DEAD/DEAH box helicase, putative
AT5G55160No related data.
AT5G58230No related data.
AT5G5842040S ribosomal protein S4 (RPS4D)
AT5G60980nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein
AT5G61060No related data.
AT5G65900DEAD/DEAH box helicase, putative
AT5G66020No related data.
AT5G66100La domain-containing protein
AT5G66750No related data.
ATCG00830No related data.
ATCG01310No related data.
ATMG01080No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
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Transcriptional Regulation

TFFamilyConfidenceDetails
AGL1MADSLAT3G58780
ARR10GARPLAT4G31920
ATHB1HD-ZIPHAT3G01470
ID1C2H2(Zn)LAT1G25250
RAV1(2)AP2/EREBPLAT1G13260
SPL14SBPLAT1G20980
TGA1bZIPLAT5G65210