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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT5G08510  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT5G08510AT5G08510GSP:2 PPI:5pentatricopeptide (PPR) repeat-containing protein.
Representative Gene Model Description
AT5G08510.1:pentatricopeptide (PPR) repeat-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT5G44230.1); Has 13705 Blast hits to 5042 proteins in 161 species: Archae - 2; Bacteria - 2; Metazoa - 44; Fungi - 66; Plants - 13317; Viruses - 0; Other Eukaryotes - 274 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT5G08510;
IPI: IPI00536311;
UniParc: UPI00000AA4A0;
REFSEQ_PROVISIONAL: NP_196468.1;
KEGG: AT5G08510;

GSPannotationmethodsrelated
AT4G34460(AGB1)AGB1 (GTP BINDING PROTEIN BETA 1); GTPase/ nucleotide binding / protein bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G34460(AGB1)AGB1 (GTP BINDING PROTEIN BETA 1); GTPase/ nucleotide binding / protein bindingtext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT5G50990hypothetical protein
AT1G73720transducin family protein / WD-40 repeat family protein
AT1G13410hypothetical protein

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
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