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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:SYP31  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT5G05760SYP31GSP:54 PPI:55SYP31 (SYNTAXIN OF PLANTS 31); SNAP receptor.
Subcellar localization
golgi: Pubmed16381842; cell plate: Pubmed12427991;
Related organ
flower      SDS fraction,1-DE      Related article
pollen      urea total extract, 1-DE      Related article
root      SDS fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
Representative Gene Model Description
AT5G05760.1:SYNTAXIN OF PLANTS 31 (SYP31); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: membrane fusion, intracellular protein transport; LOCATED IN: microsome, cell plate; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil region (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: SYP32 (SYNTAXIN OF PLANTS 32); SNAP receptor (TAIR:AT3G24350.1); Has 486 Blast hits to 485 proteins in 155 species: Archae - 0; Bacteria - 0; Metazoa - 168; Fungi - 145; Plants - 84; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink).

Related KEGG pathway    
Regulatory Pathways
   |----------Folding, Sorting and Degradation
   |--------------------SNARE interactions in vesicular transportLink to keggView overall Pathway
Database cross-references
TAIR Gene: AT5G05760;
IPI: IPI00531959;
UniParc: UPI00001362E4;
REFSEQ_PROVISIONAL: NP_196195.1;
KEGG: AT5G05760;

GSPannotationmethodsrelated
AT3G14067subtilase family proteintext mining 17179097(NULL)
AT1G05000tyrosine specific protein phosphatase family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G43850(ARD4)ARD4; acireductone dioxygenase [iron(II)-requiring]/ metal ion bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G17730(SYP23)SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G26410hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G34460(AGB1)AGB1 (GTP BINDING PROTEIN BETA 1); GTPase/ nucleotide binding / protein bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G09840(CDC48)CDC48 (CELL DIVISION CYCLE 48); ATPase/ identical protein bindingtext mining 15498773(Reconstituted Complex)
AT5G66480hypothetical proteintext mining 21798944(yeast-2-hybrid)
AT5G26280meprin and TRAF homology domain-containing protein / MATH domain-containing proteintext mining 24556609(Affinity Capture-MS)
AT3G46520(ACT12)ACT12 (ACTIN-12); structural constituent of cytoskeletontext mining 24556609(Affinity Capture-MS)
AT1G02780(emb2386)emb2386 (embryo defective 2386); structural constituent of ribosometext mining 24556609(Affinity Capture-MS)
AT5G43850(ARD4)ARD4; acireductone dioxygenase [iron(II)-requiring]/ metal ion bindingtext mining 21952135(yeast-2-hybrid)
AT3G60600(VAP)VAP (VESICLE ASSOCIATED PROTEIN); protein bindingtext mining 21798944(yeast-2-hybrid)
AT3G16450jacalin lectin family proteintext mining 24556609(Affinity Capture-MS)
AT1G43170(RP1)No related data.text mining 24556609(Affinity Capture-MS)
AT1G2740060S ribosomal protein L17 (RPL17A)text mining 24556609(Affinity Capture-MS)
AT4G17730(SYP23)SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptortext mining 21952135(yeast-2-hybrid)
AT3G48930(EMB1080)EMB1080 (embryo defective 1080); structural constituent of ribosometext mining 24556609(Affinity Capture-MS)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)
AT1G53270ABC transporter family proteintext mining 22737156(PCA)
AT5G03240(UBQ3)UBQ3 (POLYUBIQUITIN 3); protein bindingtext mining 18535787(Affinity Capture-MS)
AT3G5749040S ribosomal protein S2 (RPS2D)text mining 24556609(Affinity Capture-MS)
AT2G04280hypothetical proteintext mining 24556609(Affinity Capture-MS)
AT5G04770(CAT6)CAT6 (CATIONIC AMINO ACID TRANSPORTER 6); amino acid transmembrane transporter/ basic amino acid transmembrane transporter/ cationic amino acid transmembrane transportertext mining 22737156(PCA)
AT1G66280(BGLU22)BGLU22; catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compoundstext mining 24556609(Affinity Capture-MS)
AT3G0492040S ribosomal protein S24 (RPS24A)text mining 24556609(Affinity Capture-MS)
AT4G24190(SHD)SHD (SHEPHERD); ATP binding / unfolded protein bindingtext mining 24556609(Affinity Capture-MS)
AT4G29520hypothetical proteintext mining 24556609(Affinity Capture-MS)
AT3G12030hypothetical proteintext mining 24556609(Affinity Capture-MS)
AT4G34460(AGB1)AGB1 (GTP BINDING PROTEIN BETA 1); GTPase/ nucleotide binding / protein bindingtext mining 21952135(yeast-2-hybrid)
AT2G4051040S ribosomal protein S26 (RPS26A)text mining 24556609(Affinity Capture-MS)
AT2G18020(EMB2296)EMB2296 (embryo defective 2296); structural constituent of ribosometext mining 24556609(Affinity Capture-MS)
AT3G27310(PUX1)PUX1 (PLANT UBX DOMAIN-CONTAINING PROTEIN 1)text mining 15498773(Reconstituted Complex)
AT5G1838040S ribosomal protein S16 (RPS16C)text mining 24556609(Affinity Capture-MS)
AT1G04310(ERS2)ERS2 (ETHYLENE RESPONSE SENSOR 2); ethylene binding / glycogen synthase kinase 3/ protein histidine kinase/ receptortext mining 22737156(PCA)
AT1G27300hypothetical proteintext mining 21798944(yeast-2-hybrid)
AT3G0950060S ribosomal protein L35 (RPL35A)text mining 24556609(Affinity Capture-MS)
AT1G05000tyrosine specific protein phosphatase family proteintext mining 21952135(yeast-2-hybrid)
AT5G1520040S ribosomal protein S9 (RPS9B)text mining 24556609(Affinity Capture-MS)
AT5G2806040S ribosomal protein S24 (RPS24B)text mining 24556609(Affinity Capture-MS)
AT4G31340myosin heavy chain-relatedtext mining 24556609(Affinity Capture-MS)
AT3G0208040S ribosomal protein S19 (RPS19A)text mining 24556609(Affinity Capture-MS)
AT4G34050(CCoAOMT1)No related data.text mining 24556609(Affinity Capture-MS)
AT3G08580(AAC1)AAC1 (ADP/ATP CARRIER 1); ATP:ADP antiporter/ bindingtext mining 24556609(Affinity Capture-MS)
AT3G50910hypothetical proteintext mining 21798944(yeast-2-hybrid)
AT4G26410hypothetical proteintext mining 21952135(yeast-2-hybrid)
AT3G6287060S ribosomal protein L7A (RPL7aB)text mining 24556609(Affinity Capture-MS)
AT3G16460jacalin lectin family proteintext mining 24556609(Affinity Capture-MS)
AT3G25520(ATL5)ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5); 5S rRNA binding / structural constituent of ribosometext mining 24556609(Affinity Capture-MS)
AT3G20370meprin and TRAF homology domain-containing protein / MATH domain-containing proteintext mining 24556609(Affinity Capture-MS)
AT3G6077040S ribosomal protein S13 (RPS13A)text mining 24556609(Affinity Capture-MS)
AT4G19030(NLM1)NLM1; arsenite transmembrane transporter/ water channeltext mining 21798944(yeast-2-hybrid)
AT1G14320(SAC52)SAC52 (SUPPRESSOR OF ACAULIS 52); structural constituent of ribosometext mining 24556609(Affinity Capture-MS)

 

Predicted
Functional Partners
annotationTotal
AT3G24350No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

TFFamilyConfidenceDetails
AGL3MADSLAT2G03710