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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT5G01800  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT5G01800AT5G01800GSP:4 PPI:4saposin B domain-containing protein.
Related organ
pollen      total extract, ICAT labelling, avidin affinity flow through      Related article
root      SDS fraction,1-DE      Related article
shoot      Flow through fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
Representative Gene Model Description
AT5G01800.1:saposin B domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Saposin B (InterPro:IPR008139), Saposin-like (InterPro:IPR011001), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138); BEST Arabidopsis thaliana protein match is: saposin B domain-containing protein (TAIR:AT3G51730.1); Has 860 Blast hits to 421 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 716; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink).

Predicted Mutant Phenotypes
phloem    PO:0005417;    
Database cross-references
TAIR Gene: AT5G01800;
IPI: IPI00524212;
UniParc: UPI00000A6022;
REFSEQ_PROVISIONAL: NP_195800.1;
KEGG: AT5G01800;

GSPannotationmethodsrelated
AT4G17730(SYP23)SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G17730(SYP23)SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptortext mining 21952135(yeast-2-hybrid)
AT5G07280(EMS1)EMS1 (EXCESS MICROSPOROCYTES1); kinase/ transmembrane receptor protein kinasetext mining 24833385(PCA)
AT5G20520(WAV2)WAV2 (WAVY GROWTH 2)text mining 24833385(PCA)

 


Transcriptional Regulation

Transcription factorTarget geneDetail infoRelated Artical
SEPALLATA3[AT1G24260]AT5G01800No detail info. 19385720

 

TFFamilyConfidenceDetails
ATHB1HD-ZIPHAT3G01470
HY5bZIPLAT5G11260
RAV1(2)AP2/EREBPLAT1G13260
TGA1bZIPLAT5G65210