Home Contact Sitemap

AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT4G38550  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT4G38550AT4G38550GSP:3 PPI:3hypothetical protein.
Subcellar localization
vacuole: Pubmed18686298;
Related organ
cell suspension culture      urea fraction,1-DE      Related article
cotyledon      SDS fraction,1-DE      Related article
root      soluble fraction,1-DE      Related article
shoot      Phosphopeptide enriched fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Phosphopeptide enriched fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
Representative Gene Model Description
AT4G38550.1:LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase-like, arabidopsis (InterPro:IPR007942); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20950.1); Has 2527 Blast hits to 1973 proteins in 273 species: Archae - 3; Bacteria - 103; Metazoa - 1039; Fungi - 619; Plants - 503; Viruses - 44; Other Eukaryotes - 216 (source: NCBI BLink).

Phosphorylation info: Phosphoprotein with evidence,detail info please click the following link
Database cross-references
TAIR Gene: AT4G38550;
IPI: IPI00547260;
UniParc: UPI000000BD6F;
REFSEQ_PROVISIONAL: NP_195567.2;
KEGG: AT4G38550;

GSPannotationmethodsrelated
AT5G56750Ndr family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G56750(NDL1)No related data.text mining 21952135(yeast-2-hybrid)
AT5G44070(CAD1)CAD1 (CADMIUM SENSITIVE 1); cadmium ion binding / copper ion binding / glutathione gamma-glutamylcysteinyltransferasetext mining 21798944(yeast-2-hybrid)

 


Transcriptional Regulation

TFFamilyConfidenceDetails
AGMADSLAT4G18960
ARR10GARPLAT4G31920
ATHB1HD-ZIPHAT3G01470
RAP2.2AP2/EREBPLAT3G14230
RAV1(2)AP2/EREBPHAT1G13260
WRKY18WRKY(Zn)HAT4G31800