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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT4G37550  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT4G37550AT4G37550GSP:2 PPI:3formamidase, putative / formamide amidohydrolase, putative.
Related organ
carpel      soluble fraction,1-DE      Related article
cell suspension culture      SDS fraction,1-DE      Related article
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
cotyledon      soluble fraction,1-DE      Related article
flower      SDS fraction,1-DE      Related article
flower bud      soluble fraction,1-DE      Related article
seed      detergent fraction,1-DE      Related article
seed      urea fraction,1-DE      Related article
seed      soluble fraction,1-DE      Related article
silique      soluble fraction,1-DE      Related article
shoot      Flow through fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
Representative Gene Model Description
AT4G37550.1:formamidase, putative / formamide amidohydrolase, putative; FUNCTIONS IN: formamidase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetamidase/Formamidase (InterPro:IPR004304); BEST Arabidopsis thaliana protein match is: formamidase, putative / formamide amidohydrolase, putative (TAIR:AT4G37560.1); Has 931 Blast hits to 917 proteins in 259 species: Archae - 41; Bacteria - 569; Metazoa - 0; Fungi - 79; Plants - 32; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink).

AT4G37550.2:formamidase, putative / formamide amidohydrolase, putative; FUNCTIONS IN: formamidase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetamidase/Formamidase (InterPro:IPR004304); BEST Arabidopsis thaliana protein match is: formamidase, putative / formamide amidohydrolase, putative (TAIR:AT4G37560.1); Has 928 Blast hits to 914 proteins in 259 species: Archae - 41; Bacteria - 569; Metazoa - 0; Fungi - 79; Plants - 32; Viruses - 0; Other Eukaryotes - 207 (source: NCBI BLink).

Phosphorylation info: Phosphoprotein with evidence,detail info please click the following link
Related KEGG pathway    
Metabolic Pathways
   |----------Carbohydrate Metabolism
   |--------------------Glyoxylate and dicarboxylate metabolismLink to keggView overall Pathway
   |----------Energy Metabolism
   |--------------------Nitrogen metabolismLink to keggView overall Pathway
Related Mutant  
M3237 Related gene:AT4G37550;
Method:insertion site: 17644199
Phenotype:semi-sterile
Related PO:fruit  PO:0009001          
Related Datasource Link:CSHL database
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Database cross-references
TAIR Gene: AT4G37550;
KEGG: AT4G37550;

GSPannotationmethodsrelated
AT1G52760esterase/lipase/thioesterase family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G52760(LysoPL2)No related data.text mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT4G37560formamidase, putative / formamide amidohydrolase, putative

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

Transcription factorTarget geneDetail infoRelated Artical
PIL5\PIF1[AT2G20180]AT4G37550No detail info. 19244139

 

TFFamilyConfidenceDetails
AGL15MADSLAT5G13790
ATHB1HD-ZIPHAT3G01470
ID1C2H2(Zn)LAT1G25250
RAV1(2)AP2/EREBPHAT1G13260
TGA1bZIPHAT5G65210