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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT4G36710  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT4G36710AT4G36710GSP:7 PPI:7transcription factor.
Subcellar localization
nucleus: Pubmed12444417;
Related organ
flower bud      SDS fraction,1-DE      Related article
Representative Gene Model Description
AT4G36710.1:transcription factor; FUNCTIONS IN: transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GRAS transcription factor (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like transcription factor 6 (SCL6) (TAIR:AT4G00150.1); Has 1204 Blast hits to 1192 proteins in 182 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 1200; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

Predicted Mutant Phenotypes
primary root    PO:0020127;    
Database cross-references
TAIR Gene: AT4G36710;
IPI: IPI00538111;
UniParc: UPI00000A4498;
REFSEQ_PROVISIONAL: NP_195389.4;
KEGG: AT4G36710;

GSPannotationmethodsrelated
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G14240hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G21700(SWI3C)No related data.text mining 23449474(yeast-2-hybrid)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)
AT2G33610(SWI3B)No related data.text mining 23449474(yeast-2-hybrid)
AT5G14240hypothetical proteintext mining 21952135(yeast-2-hybrid)
AT2G46020(BRM)transcription regulatory protein SNF2, putativetext mining 23449474(yeast-2-hybrid)

 


Transcriptional Regulation

TFFamilyConfidenceDetails
AGL1MADSLAT3G58780
AGL3MADSLAT2G03710
ATHB1HD-ZIPHAT3G01470
CDC5MYBLAT1G09770
GT-3bTrihelixLAT5G01380
ID1C2H2(Zn)LAT1G25250
RAV1(2)AP2/EREBPHAT1G13260