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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:SEN1  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT4G35770SEN1GSP:6 PPI:6SEN1 (SENESCENCE 1).
Subcellar localization
plastid: Pubmed15181206;
Related organ
shoot      Phosphopeptide enriched fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
Representative Gene Model Description
AT4G35770.1:SENESCENCE 1 (SEN1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: STR16 (SULFURTRANSFERASE PROTEIN 16) (TAIR:AT5G66040.1); Has 1069 Blast hits to 1069 proteins in 323 species: Archae - 13; Bacteria - 725; Metazoa - 3; Fungi - 8; Plants - 113; Viruses - 0; Other Eukaryotes - 207 (source: NCBI BLink).

AT4G35770.2:SENESCENCE 1 (SEN1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: STR16 (SULFURTRANSFERASE PROTEIN 16) (TAIR:AT5G66040.1); Has 178 Blast hits to 178 proteins in 64 species: Archae - 0; Bacteria - 85; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).

AT4G35770.3:SENESCENCE 1 (SEN1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: STR16 (SULFURTRANSFERASE PROTEIN 16) (TAIR:AT5G66040.1); Has 179 Blast hits to 179 proteins in 64 species: Archae - 0; Bacteria - 85; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

Phosphorylation info: Phosphoprotein with evidence,detail info please click the following link
Related Mutant  
    M2604 Related gene:AT4G35750; AT4G35760; AT4G35770;
    Method:T-DNA insertion
    Phenotype:General,files
    Related Datasource Link:Riken database
    *

    Database cross-references
    TAIR Gene: AT4G35770;
    IPI: IPI00847002; IPI00846670; IPI00534149;
    UniParc: UPI00015055AC; UPI00015055AD; UPI00000AC9E2;
    REFSEQ_PROVISIONAL: NP_001078496.1; NP_001078497.1; NP_195302.1;
    KEGG: AT4G35770;

    GSPannotationmethodsrelated
    AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
    AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)
    AT4G05100(MYB74)No related data.text mining 24823379(yeast-2-hybrid)
    AT5G17490(RGL3)RGL3 (RGA-LIKE PROTEIN 3); transcription factortext mining 24823379(yeast-2-hybrid)
    AT3G02150(PTF1)PTF1 (PLASTID TRANSCRIPTION FACTOR 1); transcription factortext mining 21798944(yeast-2-hybrid)
    AT5G14760(AO)AO (L-ASPARTATE OXIDASE); L-aspartate oxidase/ electron carrier/ oxidoreductasetext mining 24823379(yeast-2-hybrid)

     


    Transcriptional Regulation

    TFFamilyConfidenceDetails
    AGL1MADSLAT3G58780
    AGL15MADSLAT5G13790
    AGL3MADSHAT2G03710
    ARR10GARPLAT4G31920
    GT-1TrihelixLAT1G13450
    RAV1(2)AP2/EREBPHAT1G13260
    TGA1bZIPHAT5G65210

    Related PPIs for TFs
    TF1TF2PPI
    AT3G58780AT5G13790GO