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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT4G33060  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT4G33060AT4G33060GSP:3 PPI:31peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein.
Related organ
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
flower bud      soluble fraction,1-DE      Related article
shoot      Phosphopeptide enriched fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
Representative Gene Model Description
AT4G33060.1:peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: CYP71 (CYCLOPHILIN71); chromatin binding / histone binding / peptidyl-prolyl cis-trans isomerase (TAIR:AT3G44600.1); Has 18511 Blast hits to 16644 proteins in 1616 species: Archae - 90; Bacteria - 4190; Metazoa - 5100; Fungi - 1622; Plants - 926; Viruses - 34; Other Eukaryotes - 6549 (source: NCBI BLink).

Phosphorylation info: Phosphoprotein with evidence,detail info please click the following link
Database cross-references
TAIR Gene: AT4G33060;
IPI: IPI00537162;
UniParc: UPI0000196EAE;
REFSEQ_PROVISIONAL: NP_195032.2;
KEGG: AT4G33060;

GSPannotationmethodsrelated
AT2G26300(GP_ALPHA_1)GP ALPHA 1 (G PROTEIN ALPHA SUBUNIT 1); GTP binding / GTPase/ channel regulator/ signal transducertext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT2G26300(GP ALPHA 1)No related data.text mining 21952135(yeast-2-hybrid)
AT3G10650hypothetical proteintext mining 21189294(Affinity Capture-MS)

 

Predicted
Functional Partners
annotationTotal
AT5G16640pentatricopeptide (PPR) repeat-containing protein
AT1G03840No related data.
AT5G61140DEAD box RNA helicase, putative
AT5G48120binding
AT5G42300No related data.
AT5G28740transcription-coupled DNA repair protein-related
AT5G19680leucine-rich repeat family protein
AT5G16270No related data.
AT4G37130hydroxyproline-rich glycoprotein family protein
AT4G21470No related data.
AT4G20440No related data.
AT4G02450glycine-rich protein
AT3G47120RNA recognition motif (RRM)-containing protein
AT3G45180ubiquitin family protein
AT3G26560ATP-dependent RNA helicase, putative
AT3G22480No related data.
AT3G12760hypothetical protein
AT3G12580No related data.
AT2G39840No related data.
AT2G33340nucleotide binding / ubiquitin-protein ligase
AT2G13540No related data.
AT1G80680No related data.
AT1G75560zinc knuckle (CCHC-type) family protein
AT1G55090carbon-nitrogen hydrolase family protein
AT1G36310methyltransferase
AT1G32490No related data.
AT1G20960No related data.
AT1G18100No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
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