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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT4G32175  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT4G32175AT4G32175GSP:3 PPI:4RNA binding.
Representative Gene Model Description
AT4G32175.1:RNA binding; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: S1, RNA binding (InterPro:IPR003029); BEST Arabidopsis thaliana protein match is: exonuclease-related (TAIR:AT2G25355.1); Has 380 Blast hits to 380 proteins in 172 species: Archae - 65; Bacteria - 0; Metazoa - 101; Fungi - 101; Plants - 32; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT4G32175;
IPI: IPI00523442;
UniParc: UPI000050D3A2;
REFSEQ_PROVISIONAL: NP_680755.2;
KEGG: AT4G32175;

GSPannotationmethodsrelated
AT4G34460(AGB1)AGB1 (GTP BINDING PROTEIN BETA 1); GTPase/ nucleotide binding / protein bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G18660zinc finger (C3HC4-type RING finger) family proteintext mining 21798944(yeast-2-hybrid)
AT4G34460(AGB1)AGB1 (GTP BINDING PROTEIN BETA 1); GTPase/ nucleotide binding / protein bindingtext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT2G25355exonuclease-related

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
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