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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT4G27130  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT4G27130AT4G27130GSP:6 PPI:9eukaryotic translation initiation factor SUI1, putative.
Representative Gene Model Description
AT4G27130.1:eukaryotic translation initiation factor SUI1, putative; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, translation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor SUI1 (InterPro:IPR001950), Eukaryotic translation initiation factor SUI1 (InterPro:IPR005874); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor SUI1, putative (TAIR:AT5G54760.2); Has 620 Blast hits to 617 proteins in 201 species: Archae - 6; Bacteria - 1; Metazoa - 295; Fungi - 109; Plants - 120; Viruses - 3; Other Eukaryotes - 86 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT4G27130;
IPI: IPI00529048;
UniParc: UPI000000144A;
REFSEQ_PROVISIONAL: NP_194443.1;
KEGG: AT4G27130;

GSPannotationmethodsrelated
AT5G35750(AHK2)AHK2 (ARABIDOPSIS HISTIDINE KINASE 2); cytokinin receptor/ osmosensor/ protein histidine kinasetext mining 18642946(yeast-2-hybrid assay)
AT3G60600(VAP)VAP (VESICLE ASSOCIATED PROTEIN); protein bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G59220(PRN)PRN (PIRIN); calmodulin bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G35750(HK2)No related data.text mining 18642946(yeast-2-hybrid)
AT3G60600(VAP)VAP (VESICLE ASSOCIATED PROTEIN); protein bindingtext mining 21952135(yeast-2-hybrid)
AT3G59220(PRN)PRN (PIRIN); calmodulin bindingtext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT1G54290eukaryotic translation initiation factor SUI1, putative
AT5G54760eukaryotic translation initiation factor SUI1, putative
AT5G54940eukaryotic translation initiation factor SUI1, putative

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

TFFamilyConfidenceDetails
AGL3MADSLAT2G03710
ARR1GARP/ARR-BLAT3G16857
ATHB1HD-ZIPLAT3G01470
ATHB5HD-ZIPLAT5G65310
RAP2.2AP2/EREBPLAT3G14230
RAV1(2)AP2/EREBPLAT1G13260
TGA1bZIPLAT5G65210
WRKY18WRKY(Zn)LAT4G31800