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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:PRXR1  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT4G21960PRXR1GSP:4 PPI:6PRXR1; electron carrier/ heme binding / peroxidase.
Subcellar localization
extracellular: Pubmed16381842;
Related organ
carpel      detergent fraction,1-DE      Related article
juvenile leaf      soluble fraction,1-DE      Related article
root      soluble fraction,1-DE      Related article
root      SDS fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      soluble fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchae; IMAC affinity chromatography ng      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
Representative Gene Model Description
AT4G21960.1:PRXR1; FUNCTIONS IN: electron carrier activity, peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: peroxidase 21 (PER21) (P21) (PRXR5) (TAIR:AT2G37130.1); Has 3093 Blast hits to 3081 proteins in 233 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 287; Plants - 2759; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink).

Related KEGG pathway    
Metabolic Pathways
   |----------Amino Acid Metabolism
   |--------------------Phenylalanine metabolismLink to keggView overall Pathway
   |----------Energy Metabolism
   |--------------------Methane metabolismLink to keggView overall Pathway
   |----------Biosynthesis of Secondary Metabolites
   |--------------------Stilbene, coumarine and lignin biosynthesisLink to keggView overall Pathway
Database cross-references
TAIR Gene: AT4G21960;
IPI: IPI00540197;
UniParc: UPI0000131543;
REFSEQ_PROVISIONAL: NP_567641.1;
KEGG: AT4G21960;

GSPannotationmethodsrelated
AT4G14716(ATARD1)ATARD1 (ACIREDUCTONE DIOXYGENASE 1); acireductone dioxygenase [iron(II)-requiring]/ metal ion bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G24190(SHD)SHD (SHEPHERD); ATP binding / unfolded protein bindingtext mining 25297550(yeast-2-hybrid)
AT1G63480DNA-binding family proteintext mining 24218605(yeast-2-hybrid)
AT4G14716(ARD1)No related data.text mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT5G64110peroxidase, putative
AT5G14130peroxidase, putative

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

Transcription factorTarget geneDetail infoRelated Artical
SEPALLATA3[AT1G24260]AT4G21960No detail info. 19385720

 

TFFamilyConfidenceDetails
AGL1MADSLAT3G58780
AGL15MADSLAT5G13790
ARR10GARPLAT4G31920
ATHB1HD-ZIPHAT3G01470
ATHB5HD-ZIPHAT5G65310
RAV1(2)AP2/EREBPHAT1G13260

Related PPIs for TFs
TF1TF2PPI
AT3G58780AT5G13790GO