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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT4G21830  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT4G21830AT4G21830GSP:2 PPI:8methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein.
Subcellar localization
nucleus: Pubmed12444417;
Representative Gene Model Description
AT4G21830.1:methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein; FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: response to singlet oxygen; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase domain-containing protein / SelR domain-containing protein (TAIR:AT4G21840.1); Has 5883 Blast hits to 5882 proteins in 1229 species: Archae - 51; Bacteria - 2686; Metazoa - 217; Fungi - 85; Plants - 108; Viruses - 1; Other Eukaryotes - 2735 (source: NCBI BLink).

AT4G21830.2:methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein; FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: response to singlet oxygen; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase domain-containing protein / SelR domain-containing protein (TAIR:AT4G21840.1); Has 5883 Blast hits to 5882 proteins in 1229 species: Archae - 51; Bacteria - 2686; Metazoa - 217; Fungi - 85; Plants - 108; Viruses - 1; Other Eukaryotes - 2735 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT4G21830;
IPI: IPI00846702; IPI00532707;
UniParc: UPI00000AAC95; UPI00000AC4D1;
REFSEQ_PROVISIONAL: NP_001078422.1; NP_567637.1;
KEGG: AT4G21830;

GSPannotationmethodsrelated
AT5G14240hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G14240hypothetical proteintext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT5G12320ankyrin repeat family protein
AT4G04840methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein
AT4G21850methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein
AT4G04830methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein
AT4G21840methionine sulfoxide reductase domain-containing protein / SelR domain-containing protein
AT4G04810methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

Transcription factorTarget geneDetail infoRelated Artical
LHP1[AT5G17690]AT4G21830No detail info. 17542647
TFL2[AT5G17690]AT4G21830No detail info. 17542647

 

TFFamilyConfidenceDetails
AGL1MADSLAT3G58780
AGL15MADSLAT5G13790
AGL2MADSLAT5G15800
AGL3MADSHAT2G03710
ARR10GARPHAT4G31920
ATHB1HD-ZIPHAT3G01470
RAP2.2AP2/EREBPLAT3G14230
RAV1(2)AP2/EREBPHAT1G13260
TGA1bZIPHAT5G65210

Related PPIs for TFs
TF1TF2PPI
AT3G58780AT5G13790GO
AT3G58780AT5G15800GO