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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT4G20930  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT4G20930AT4G20930GSP:3 PPI:83-hydroxyisobutyrate dehydrogenase, putative.
Subcellar localization
mitochondrion: Pubmed16381842;
Related organ
carpel      soluble fraction,1-DE      Related article
cell suspension culture      triton fraction,Schagger 1-DE      Related article
flower      soluble fraction,1-DE      Related article
flower bud      soluble fraction,1-DE      Related article
Representative Gene Model Description
AT4G20930.1:3-hydroxyisobutyrate dehydrogenase, putative; FUNCTIONS IN: in 7 functions; INVOLVED IN: pentose-phosphate shunt, valine metabolic process, valine catabolic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), 3-hydroxyisobutyrate dehydrogenase (InterPro:IPR011548), NAD(P)-binding (InterPro:IPR016040), 3-hydroxyisobutyrate dehydrogenase-related, conserved site (InterPro:IPR002204); BEST Arabidopsis thaliana protein match is: GLYR2 (GLYOXYLATE REDUCTASE 2); glyoxylate reductase (NADP)/ phosphogluconate dehydrogenase (decarboxylating) (TAIR:AT1G17650.1); Has 10362 Blast hits to 10344 proteins in 1053 species: Archae - 94; Bacteria - 4661; Metazoa - 269; Fungi - 232; Plants - 134; Viruses - 2; Other Eukaryotes - 4970 (source: NCBI BLink).

Related KEGG pathway    
Metabolic Pathways
   |----------Amino Acid Metabolism
   |--------------------Valine, leucine and isoleucine degradationLink to keggView overall Pathway
Database cross-references
TAIR Gene: AT4G20930;
IPI: IPI00533209;
UniParc: UPI0000162AE0;
REFSEQ_PROVISIONAL: NP_567617.1;
KEGG: AT4G20930;

GSPannotationmethodsrelated
AT4G14710(ATARD2)acireductone dioxygenase [iron(II)-requiring]/ metal ion bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G14710(ATARD2)acireductone dioxygenase [iron(II)-requiring]/ metal ion bindingtext mining 21952135(yeast-2-hybrid)
AT4G291206-phosphogluconate dehydrogenase NAD-binding domain-containing proteinEC

 

Predicted
Functional Partners
annotationTotal
AT4G291206-phosphogluconate dehydrogenase NAD-binding domain-containing protein
AT1G711806-phosphogluconate dehydrogenase NAD-binding domain-containing protein
AT1G711706-phosphogluconate dehydrogenase NAD-binding domain-containing protein
AT1G17650No related data.
AT3G25530No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
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Transcriptional Regulation

TFFamilyConfidenceDetails
AGL3MADSLAT2G03710
WRKY18WRKY(Zn)LAT4G31800