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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:CHLI1  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT4G18480CHLI1GSP:4 PPI:5CHLI1; ATPase/ magnesium chelatase.
Subcellar localization
plastid: Pubmed16381842;
Related organ
carpel      detergent fraction,1-DE      Related article
carpel      urea fraction,1-DE      Related article
carpel      soluble fraction,1-DE      Related article
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      SDS fraction,1-DE      Related article
cell suspension culture      detergent fraction,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
cell suspension culture      triton fraction,Schagger 1-DE      Related article
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
cell suspension culture      SDS fraction,Schagger 1-DE      Related article
cotyledon      SDS fraction,1-DE      Related article
cotyledon      soluble fraction,1-DE      Related article
juvenile leaf      SDS fraction,1-DE      Related article
juvenile leaf      soluble fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
shoot      Phosphopeptide enriched fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Flow through fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Flow through fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
Representative Gene Model Description
AT4G18480.1:CHLI1; FUNCTIONS IN: magnesium chelatase activity, ATPase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: magnesium chelatase complex, cell wall, chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Magnesium chelatase, ChlI subunit (InterPro:IPR000523), Magnesium chelatase, ATPase subunit I (InterPro:IPR011775); BEST Arabidopsis thaliana protein match is: CHLI2 (MAGNESIUM CHELATASE I2); ATPase/ magnesium chelatase (TAIR:AT5G45930.1); Has 4212 Blast hits to 4212 proteins in 892 species: Archae - 176; Bacteria - 2874; Metazoa - 2; Fungi - 0; Plants - 127; Viruses - 0; Other Eukaryotes - 1033 (source: NCBI BLink).

Phosphorylation info: Phosphoprotein with evidence,detail info please click the following link
Related KEGG pathway    
Metabolic Pathways
   |----------Metabolism of Cofactors and Vitamins
   |--------------------Porphyrin and chlorophyll metabolismLink to keggView overall Pathway
Related Mutant  
M1938 Related gene:AT4G18480;
Method:transposon-insertional distance from first ATG: 1384
Phenotype:Leaves,pale green
Related PO:leaf  PO:0009025          
Related Datasource Link:RAPID

M2059 Related gene:AT4G18480; AT5G45930;
Method:NULL
Phenotype:Furthermore, double mutants of cs215/cs215 chli2/chli2 were indistinguishable from the cs215 single (cs215/cs215 CHLI2/CHLI2) mutant (Fig. 1).(PMID: 19363094)
Related PO:seedling  PO:0008037    chlorenchyma  PO:0005426          
Related Datasource Link:

M2060 Related gene:AT4G18480;
Method:NULL
Phenotype:Homozygous cs215 (cs215/cs215) mutants were albino, while heterozygous (cs215/+) plants were pale green (Fig. 1).When a cs215/+ plant was crossed with a chli1-knockout mutant (see below), the F1 seedlings had the same phenotype as cs215/cs215 (cs215/chli1; Fig. 1A),(PMID: 19363094) It was yellow in appearance (Fig. 1A) and had less than 10% of the wild-type level of chlorophylls (Fig. 1B), similar to the levels reported for other chli1-null mutants (Rissler et al., 2002).(PMID: 19363094)
Related PO:seedling  PO:0008037    chlorenchyma  PO:0005426          
Related Datasource Link:

    M2332 Related gene:AT4G18480;
    Method:NULL
    Phenotype:albino, pale-green
    Related PO:seedling  PO:0008037    leaf  PO:0009025          
    Related Datasource Link:Chloroplast Function Database

    M4379 Related gene:AT4G18480;
    Method:Irradiation ,mutation site Exon 3
    Phenotype:Seed Pigment,Pigment Defective
    Related PO:seed  PO:0009010          
    Related Datasource Link:SeedGenes Database

    M4380 Related gene:AT4G18480;
    Method:T-DNA Insertion_Mutant,mutation site Intron 2
    Phenotype:Seed Pigment,Pigment Defective
    Related PO:seed  PO:0009010          
    Related Datasource Link:SeedGenes Database

      M5377 Related gene:AT4G18480;
      Method:NULL
      Phenotype:rtl1 mutant allele of the CHLH gene in Arabidopsis thaliana showed ABA insensitive phenotypes in both stomatal movement and seed germination.(PMID: 23011401)| Upregulation of CHLI1 resulted in ABA hypersensitivity in seed germination, while downregulation of CHLI conferred ABA insensitivity in stomatal response in Arabidopsis.(PMID: 23011401)| the rtl1 mutant has wildtype response to ABA in early seedling growth, in stomatal movement. while cch mutant showed significant ABA insensitive phenotype in early seedling growth (Fig. 3b, c), the rtl1 mutant is insensitive to ABA.(PMID: 23011401)
      Related PO:stomatal complex  PO:0002000|seed    
      Related Datasource Link:
      *

      Predicted Mutant Phenotypes
      phloem    PO:0005417;    
      Database cross-references
      Entrez Gene: s;
      TAIR Gene: AT4G18480;
      IPI: s;
      UniProtKB/TrEMBL: s;
      UniParc: s;
      REFSEQ_PROVISIONAL: s;
      KEGG: AT4G18480;

      GSPannotationmethodsrelated
      AT5G56750Ndr family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
      AT5G56750(NDL1)No related data.text mining 21952135(yeast-2-hybrid)
      AT1G08520(PDE166)No related data.EC
      AT5G13630(GUN5)GUN5 (GENOMES UNCOUPLED 5); magnesium chelataseEC

       

      Predicted
      Functional Partners
      annotationTotal
      AT5G45930No related data.

      O: Ortholog interaction datasets
      G: Shared biological function:Go Ontology
      E: Co-expression
      F: Gene fusion method
      N: Gene neighbors method
      P: Phylogenetic profile method
      D: Enriched domain pair
      What does the displayed number mean when your mouse moved over a certain icon?(LR)


      Transcriptional Regulation

      TFFamilyConfidenceDetails
      AGL1MADSLAT3G58780
      ARR10GARPLAT4G31920
      MYB2MYBHAT2G47190
      RAP2.2AP2/EREBPLAT3G14230
      RAV1(2)AP2/EREBPHAT1G13260
      TGA1bZIPHAT5G65210