Home Contact Sitemap

AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:UNE16  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT4G13640UNE16GSP:34 PPI:35UNE16 (unfertilized embryo sac 16); transcription factor.
Subcellar localization
nucleus: Pubmed12444417;
Related organ
cotyledon      soluble fraction,1-DE      Related article
juvenile leaf      soluble fraction,1-DE      Related article
Representative Gene Model Description
AT4G13640.1:unfertilized embryo sac 16 (UNE16); FUNCTIONS IN: transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-type HTH DNA-binding domain (InterPro:IPR017930), Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb family transcription factor (TAIR:AT3G24120.1); Has 906 Blast hits to 896 proteins in 41 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 893; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

AT4G13640.2:unfertilized embryo sac 16 (UNE16); FUNCTIONS IN: transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-type HTH DNA-binding domain (InterPro:IPR017930), Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb family transcription factor (TAIR:AT3G24120.2); Has 907 Blast hits to 897 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 896; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT4G13640;
IPI: IPI00657591; IPI00656907;
UniParc: UPI00005DC06E; UPI00000AA648;
REFSEQ_PROVISIONAL: NP_567408.1; NP_001031626.1;
KEGG: AT4G13640;

GSPannotationmethodsrelated
AT1G19240hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G50730hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT2G03760(ST)ST; brassinosteroid sulfotransferase/ sulfotransferasetext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G03990esterase/lipase/thioesterase family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G24120myb family transcription factortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G61480hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT2G26300(GP_ALPHA_1)GP ALPHA 1 (G PROTEIN ALPHA SUBUNIT 1); GTP binding / GTPase/ channel regulator/ signal transducertext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G13640(UNE16)UNE16 (unfertilized embryo sac 16); transcription factortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G17730(SYP23)SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G13430ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putativetext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G20150(SPX1)SPX1 (SPX DOMAIN GENE 1)text mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G27840(TOPP8)TOPP8; protein serine/threonine phosphatasetext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G26410hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G19240hypothetical proteintext mining 21952135(yeast-2-hybrid)
AT1G31780hypothetical proteintext mining 21798944(yeast-2-hybrid)
AT3G07310hypothetical proteintext mining 21798944(yeast-2-hybrid)
AT4G17730(SYP23)SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptortext mining 21952135(yeast-2-hybrid)
AT4G13640(UNE16)UNE16 (unfertilized embryo sac 16); transcription factortext mining 21952135(yeast-2-hybrid)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)
AT3G61480hypothetical proteintext mining 21952135(yeast-2-hybrid)
AT3G48150(APC8)APC8 (ANAPHASE-PROMOTING COMPLEX SUBUNIT 8); bindingtext mining 21798944(yeast-2-hybrid)
AT5G27840(TOPP8)TOPP8; protein serine/threonine phosphatasetext mining 21952135(yeast-2-hybrid)
AT4G00150(HAM3)No related data.text mining 21798944(yeast-2-hybrid)
AT2G03760(SOT12)No related data.text mining 21952135(yeast-2-hybrid)
AT3G03990esterase/lipase/thioesterase family proteintext mining 21952135(yeast-2-hybrid)
AT5G20150(SPX1)SPX1 (SPX DOMAIN GENE 1)text mining 21952135(yeast-2-hybrid)
AT4G26410hypothetical proteintext mining 21952135(yeast-2-hybrid)
AT3G24120myb family transcription factortext mining 21952135(yeast-2-hybrid)
AT1G50730hypothetical proteintext mining 21952135(yeast-2-hybrid)
AT2G26300(GP ALPHA 1)No related data.text mining 21952135(yeast-2-hybrid)
AT5G66770scarecrow transcription factor family proteintext mining 21798944(yeast-2-hybrid)
AT4G17730(SYP23)SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptortext mining 21952135(yeast-2-hybrid)
AT5G13430ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putativetext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT3G24120myb family transcription factor

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

TFFamilyConfidenceDetails
RAP2.2AP2/EREBPLAT3G14230