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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT4G12510  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT4G12510AT4G12510GSP:2 PPI:3protease inhibitor/seed storage/lipid transfer protein (LTP) family protein.
Representative Gene Model Description
AT4G12510.1:protease inhibitor/seed storage/lipid transfer protein (LTP) family protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein and hydrophobic protein, helical (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (TAIR:AT4G12520.1); Has 534 Blast hits to 530 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 534; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT4G12510;
IPI: IPI00524326;
REFSEQ_PROVISIONAL: NP_567391.1;
KEGG: AT4G12510;

GSPannotationmethodsrelated
AT4G17730(SYP23)SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G17730(SYP23)SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptortext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT4G12530protease inhibitor/seed storage/lipid transfer protein (LTP) family protein

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

Transcription factorTarget geneDetail infoRelated Artical
LHP1[AT5G17690]AT4G12510No detail info. 17542647
TFL2[AT5G17690]AT4G12510No detail info. 17542647

 

TFFamilyConfidenceDetails
AGMADSLAT4G18960
AGL1MADSLAT3G58780
AGL15MADSLAT5G13790
AGL3MADSHAT2G03710
ARR10GARPLAT4G31920
ATHB1HD-ZIPHAT3G01470
CDC5MYBLAT1G09770
RAV1(2)AP2/EREBPHAT1G13260

Related PPIs for TFs
TF1TF2PPI
AT4G18960AT3G58780GO
AT4G18960AT5G13790GO
AT3G58780AT5G13790GO