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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:EIF3A  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT4G11420EIF3AGSP:7 PPI:159EIF3A (EUKARYOTIC TRANSLATION INITIATION FACTOR 3A); translation initiation factor.
Subcellar localization
plasma membrane: Pubmed17317660;
Related organ
carpel      detergent fraction,1-DE      Related article
carpel      urea fraction,1-DE      Related article
carpel      soluble fraction,1-DE      Related article
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      SDS fraction,1-DE      Related article
cell suspension culture      detergent fraction,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
cell suspension culture      triton fraction,Schagger 1-DE      Related article
cotyledon      SDS fraction,1-DE      Related article
flower      SDS fraction,1-DE      Related article
flower bud      SDS fraction,1-DE      Related article
juvenile leaf      SDS fraction,1-DE      Related article
pollen      combined fractions, 1-DE      Related article
pollen      soluble fraction, 1-DE      Related article
pollen      urea fraction, 1-DE      Related article
pollen      cyclohexane fraction, 1-DE      Related article
pollen      detergent fraction, 1-DE      Related article
pollen      urea total extract, 1-DE      Related article
pollen      total extract, ICAT labelling, avidin affinity flow through      Related article
root      SDS fraction,1-DE      Related article
root      soluble fraction,1-DE      Related article
seed      detergent fraction,1-DE      Related article
seed      urea fraction,1-DE      Related article
seed      soluble fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      soluble fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
shoot      Phosphopeptide enriched fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Flow through fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Flow through fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchae; IMAC affinity chromatography ng      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
Representative Gene Model Description
AT4G11420.1:EUKARYOTIC TRANSLATION INITIATION FACTOR 3A (EIF3A); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: eukaryotic translation initiation factor 3 complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component region PCI (InterPro:IPR000717); Has 128361 Blast hits to 60987 proteins in 2045 species: Archae - 837; Bacteria - 14014; Metazoa - 65127; Fungi - 8610; Plants - 3574; Viruses - 436; Other Eukaryotes - 35763 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT4G11420;
IPI: IPI00544672;
UniParc: UPI000012D30F;
REFSEQ_PROVISIONAL: NP_192881.1;
KEGG: AT4G11420;

GSPannotationmethodsrelated
AT3G60240(EIF4G)EIF4G (EUKARYOTIC TRANSLATION INITIATION FACTOR 4G); translation initiation factortext mining 11042177(NULL)
AT2G26300(GP_ALPHA_1)GP ALPHA 1 (G PROTEIN ALPHA SUBUNIT 1); GTP binding / GTPase/ channel regulator/ signal transducertext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G54610(HAG1)GCN5; DNA binding / H3 histone acetyltransferase/ histone acetyltransferasetext mining 18498779(yeast-2-hybrid)
AT1G10840(TIF3H1)TIF3H1; translation initiation factortext mining 15548739(yeast-2-hybrid)
AT2G26300(GP ALPHA 1)No related data.text mining 21952135(yeast-2-hybrid)
AT5G03240(UBQ3)UBQ3 (POLYUBIQUITIN 3); protein bindingtext mining 23667124(Affinity Capture-MS)
AT5G61200hypothetical proteintext mining 19745810(Reconstituted Complex)

 

Predicted
Functional Partners
annotationTotal
AT1G66070translation initiation factor-related
AT2G33210No related data.
AT5G56740No related data.
AT5G20920No related data.
AT1G72370No related data.
AT2G40290eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-alpha, putative
AT4G37910No related data.
AT1G02840No related data.
AT1G03530No related data.
AT1G05350thiF family protein
AT1G07770No related data.
AT1G08190vacuolar assembly protein, putative (VPS41)
AT1G09020No related data.
AT1G11980No related data.
AT1G12920No related data.
AT1G13950No related data.
AT1G15440transducin family protein / WD-40 repeat family protein
AT1G18080No related data.
AT1G18100No related data.
AT1G22300No related data.
AT1G22780No related data.
AT1G24510T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative
AT1G25490No related data.
AT1G26480No related data.
AT1G29900No related data.
AT1G3403040S ribosomal protein S18 (RPS18B)
AT1G36730eukaryotic translation initiation factor 5, putative / eIF-5, putative
AT1G44910protein binding
AT1G48605No related data.
AT1G4883040S ribosomal protein S7 (RPS7A)
AT1G48920No related data.
AT1G49760No related data.
AT1G54270No related data.
AT1G54290eukaryotic translation initiation factor SUI1, putative
AT1G58380No related data.
AT1G64550No related data.
AT1G75560zinc knuckle (CCHC-type) family protein
AT1G77840eukaryotic translation initiation factor 5, putative / eIF-5, putative
AT1G79930No related data.
AT2G17190ubiquitin family protein
AT2G20560DNAJ heat shock family protein
AT2G21410No related data.
AT2G23070casein kinase II alpha chain, putative
AT2G26140No related data.
AT2G3161040S ribosomal protein S3 (RPS3A)
AT2G37340No related data.
AT2G39740hypothetical protein
AT2G39990No related data.
AT2G41630No related data.
AT2G4184040S ribosomal protein S2 (RPS2C)
AT2G42520DEAD box RNA helicase, putative
AT2G44680No related data.
AT2G46280No related data.
AT3G0208040S ribosomal protein S19 (RPS19A)
AT3G02200proteasome family protein
AT3G02530chaperonin, putative
AT3G02540No related data.
AT3G03960chaperonin, putative
AT3G04770No related data.
AT3G05090transducin family protein / WD-40 repeat family protein
AT3G09360RNA polymerase II transcription factor/ protein binding / transcription activator/ transcription regulator/ translation initiation factor/ zinc ion binding
AT3G10330transcription initiation factor IIB-2 / general transcription factor TFIIB-2 (TFIIB2)
AT3G11270No related data.
AT3G11830chaperonin, putative
AT3G12580No related data.
AT3G13920No related data.
AT3G18610No related data.
AT3G19760eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putative
AT3G23990No related data.
AT3G25800No related data.
AT3G26618No related data.
AT3G46040No related data.
AT3G5387040S ribosomal protein S3 (RPS3B)
AT3G54540No related data.
AT3G55620No related data.
AT3G57150No related data.
AT3G57290No related data.
AT3G5749040S ribosomal protein S2 (RPS2D)
AT3G58140phenylalanyl-tRNA synthetase class IIc family protein
AT3G58510DEAD box RNA helicase, putative (RH11)
AT3G61110No related data.
AT4G00100No related data.
AT4G09800No related data.
AT4G11160translation initiation factor IF-2, mitochondrial, putative
AT4G14960No related data.
AT4G18710No related data.
AT4G19210No related data.
AT4G20980eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putative
AT4G22540No related data.
AT4G22910No related data.
AT4G24190No related data.
AT4G25230No related data.
AT4G28060cytochrome c oxidase subunit 6b, putative
AT4G3080040S ribosomal protein S11 (RPS11B)
AT4G30890No related data.
AT4G33260No related data.
AT4G33270No related data.
AT4G34110No related data.
AT4G3455540S ribosomal protein S25, putative
AT4G36020No related data.
AT4G39280phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative
AT5G0296040S ribosomal protein S23 (RPS23B)
AT5G06360ribosomal protein S8e family protein
AT5G0709040S ribosomal protein S4 (RPS4B)
AT5G09590No related data.
AT5G09920No related data.
AT5G10790No related data.
AT5G11900eukaryotic translation initiation factor SUI1 family protein
AT5G12190RNA recognition motif (RRM)-containing protein
AT5G1432030S ribosomal protein S13, chloroplast (CS13)
AT5G14640No related data.
AT5G1520040S ribosomal protein S9 (RPS9B)
AT5G1552040S ribosomal protein S19 (RPS19B)
AT5G15550transducin family protein / WD-40 repeat family protein
AT5G15750RNA-binding S4 domain-containing protein
AT5G16270No related data.
AT5G2029040S ribosomal protein S8 (RPS8A)
AT5G20890chaperonin, putative
AT5G2354026S proteasome regulatory subunit, putative
AT5G25780No related data.
AT5G26360chaperonin, putative
AT5G27570WD-40 repeat family protein
AT5G27640No related data.
AT5G3553040S ribosomal protein S3 (RPS3C)
AT5G42020No related data.
AT5G45550mob1/phocein family protein
AT5G47010No related data.
AT5G52640No related data.
AT5G53770nucleotidyltransferase family protein
AT5G54940eukaryotic translation initiation factor SUI1, putative
AT5G56010No related data.
AT5G56030No related data.
AT5G57870eukaryotic translation initiation factor 4F, putative / eIF-4F, putative
AT5G57990No related data.
AT5G5842040S ribosomal protein S4 (RPS4D)
AT5G5985040S ribosomal protein S15A (RPS15aF)
AT5G60790No related data.
AT5G60980nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein
AT5G62040brother of FT and TFL1 protein (BFT)
AT5G66020No related data.
AT5G67380No related data.
ATCG00065No related data.
ATCG00160No related data.
ATCG00905No related data.
ATCG01230No related data.
ATMG00980No related data.
AT4G33250No related data.
AT5G06000No related data.
AT3G6077040S ribosomal protein S13 (RPS13A)
AT3G11400No related data.
AT1G04170No related data.
AT3G56150No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
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Transcriptional Regulation

TFFamilyConfidenceDetails
RAV1(2)AP2/EREBPLAT1G13260
TGA1bZIPLAT5G65210