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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT4G10840  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT4G10840AT4G10840GSP:9 PPI:13kinesin light chain-related.
Subcellar localization
plasma membrane: Pubmed17317660;
Related organ
carpel      detergent fraction,1-DE      Related article
carpel      urea fraction,1-DE      Related article
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      detergent fraction,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
cotyledon      SDS fraction,1-DE      Related article
flower      SDS fraction,1-DE      Related article
flower bud      SDS fraction,1-DE      Related article
juvenile leaf      SDS fraction,1-DE      Related article
root      soluble fraction,1-DE      Related article
root      SDS fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      soluble fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
shoot      Phosphopeptide enriched fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
Representative Gene Model Description
AT4G10840.1:kinesin light chain-related; FUNCTIONS IN: binding; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide region (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: kinesin light chain-related (TAIR:AT3G27960.1); Has 11121 Blast hits to 4321 proteins in 387 species: Archae - 236; Bacteria - 3062; Metazoa - 5775; Fungi - 596; Plants - 190; Viruses - 6; Other Eukaryotes - 1256 (source: NCBI BLink).

AT4G10840.2:kinesin light chain-related; FUNCTIONS IN: binding; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide region (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: kinesin light chain-related (TAIR:AT3G27960.1); Has 9015 Blast hits to 3672 proteins in 347 species: Archae - 155; Bacteria - 2443; Metazoa - 4903; Fungi - 379; Plants - 236; Viruses - 6; Other Eukaryotes - 893 (source: NCBI BLink).

Phosphorylation info: Phosphoprotein with evidence,detail info please click the following link
Database cross-references
TAIR Gene: AT4G10840;
IPI: IPI00540102; IPI00538669;
UniParc: UPI000034F1DD; UPI00000ABFAF;
REFSEQ_PROVISIONAL: NP_192822.1; NP_974530.1;
KEGG: AT4G10840;

GSPannotationmethodsrelated
AT5G56750Ndr family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G15000hypothetical proteintext mining 21798944(yeast-2-hybrid)
AT5G03240(UBQ3)UBQ3 (POLYUBIQUITIN 3); protein bindingtext mining 23667124(Affinity Capture-MS)
AT5G03040(iqd2)iqd2 (IQ-domain 2); calmodulin bindingtext mining 21798944(yeast-2-hybrid)
AT1G53800endonucleasetext mining 21798944(yeast-2-hybrid)
AT5G56750(NDL1)No related data.text mining 21952135(yeast-2-hybrid)
AT3G21175(ZML1)ZML1 (ZIM-LIKE 1); sequence-specific DNA binding / transcription factor/ zinc ion bindingtext mining 21798944(yeast-2-hybrid)
AT3G24860hydroxyproline-rich glycoprotein family proteintext mining 21798944(yeast-2-hybrid)
AT1G31350(KUF1)No related data.text mining 21798944(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT1G03540pentatricopeptide (PPR) repeat-containing protein
AT5G13770pentatricopeptide (PPR) repeat-containing protein
AT2G36660No related data.
AT3G18060transducin family protein / WD-40 repeat family protein

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

TFFamilyConfidenceDetails
RAP2.2AP2/EREBPLAT3G14230
RAV1(2)AP2/EREBPLAT1G13260