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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:ATMYB6  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT4G09460ATMYB6GSP:4 PPI:4ATMYB6; DNA binding / transcription factor.
Subcellar localization
nucleus: Pubmed12444417;
Related organ
silique      urea fraction,1-DE      Related article
Representative Gene Model Description
AT4G09460.1:ATMYB6; FUNCTIONS IN: transcription factor activity, DNA binding; INVOLVED IN: in 9 processes; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-type HTH DNA-binding domain (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: HOS10 (HIGH RESPONSE TO OSMOTIC STRESS 10); DNA binding / transcription regulator (TAIR:AT1G35515.1); Has 6427 Blast hits to 5940 proteins in 352 species: Archae - 0; Bacteria - 0; Metazoa - 670; Fungi - 284; Plants - 3888; Viruses - 3; Other Eukaryotes - 1582 (source: NCBI BLink).

Predicted Mutant Phenotypes
phloem    PO:0005417;    
Database cross-references
TAIR Gene: AT4G09460;
IPI: IPI00548177;
UniParc: UPI000000C2C0;
REFSEQ_PROVISIONAL: NP_192684.1;
KEGG: AT4G09460;

GSPannotationmethodsrelated
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G01240hypothetical proteintext mining 21798944(yeast-2-hybrid)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)
AT2G46550hypothetical proteintext mining 21798944(yeast-2-hybrid)

 


Transcriptional Regulation

TFFamilyConfidenceDetails
AGL1MADSLAT3G58780
AGL2MADSLAT5G15800
AGL3MADSHAT2G03710
GT-3bTrihelixLAT5G01380
RAV1(2)AP2/EREBPHAT1G13260
TGA1bZIPHAT5G65210

Related PPIs for TFs
TF1TF2PPI
AT3G58780AT5G15800GO