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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:XT1  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT3G62720XT1GSP:9 PPI:10XT1 (XYLOSYLTRANSFERASE 1); UDP-xylosyltransferase/ transferase/ transferase, transferring glycosyl groups / xyloglucan 6-xylosyltransferase.
Subcellar localization
golgi: Pubmed16381842;
Related organ
cell suspension culture      triton fraction,Schagger 1-DE      Related article
flower      SDS fraction,1-DE      Related article
Representative Gene Model Description
AT3G62720.1:XYLOSYLTRANSFERASE 1 (XT1); FUNCTIONS IN: xyloglucan 6-xylosyltransferase activity, UDP-xylosyltransferase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: polysaccharide biosynthetic process, xyloglucan biosynthetic process, root hair elongation; LOCATED IN: mitochondrion, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: XT2 (UDP-XYLOSYLTRANSFERASE 2); UDP-xylosyltransferase/ transferase/ transferase, transferring glycosyl groups / xyloglucan 6-xylosyltransferase (TAIR:AT4G02500.1); Has 289 Blast hits to 289 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 106; Plants - 173; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).

AT3G62720.2:XYLOSYLTRANSFERASE 1 (XT1); FUNCTIONS IN: xyloglucan 6-xylosyltransferase activity, UDP-xylosyltransferase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: polysaccharide biosynthetic process, xyloglucan biosynthetic process, root hair elongation; LOCATED IN: mitochondrion, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: XT2 (UDP-XYLOSYLTRANSFERASE 2); UDP-xylosyltransferase/ transferase/ transferase, transferring glycosyl groups / xyloglucan 6-xylosyltransferase (TAIR:AT4G02500.1); Has 289 Blast hits to 289 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 106; Plants - 173; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).

Related Mutant  
M2252 Related gene:AT3G62720; AT4G02500;
Method:T-DNA insertion
Phenotype:Compared with wild-type, xxt1, or xxt2 plants, the xxt1 xxt2 double mutant plants grew more slowly, were smaller at maturity (see Supplemental Figures 1A and 1B online), and had a severe root hair phenotype (Figures 2A to 2H). In contrast with either wild-type (Figures 2A, 2E, and 2G) or single mutant plants (Figures 2B and 2C), xxt1 xxt2 seedlings (Figures 2D, 2F, and 2H) had short root hairs with bulging bases.(PMID: 18544630)
Related PO:whole plant  PO:0000003    root hair  PO:0000256          
Related Datasource Link:
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Database cross-references
TAIR Gene: AT3G62720;
KEGG: AT3G62720;

GSPannotationmethodsrelated
AT5G56750Ndr family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT2G20370(MUR3)MUR3 (MURUS 3); catalytic/ transferase, transferring glycosyl groupstext mining 25326916(PCA)
AT5G56750(NDL1)No related data.text mining 21952135(yeast-2-hybrid)
AT1G74380(XXT5)XXT5 (XYLOGLUCAN XYLOSYLTRANSFERASE 5); transferase/ transferase, transferring glycosyl groups / xyloglucan 6-xylosyltransferasetext mining 25326916(PCA)
AT4G02500(XT2)XT2 (UDP-XYLOSYLTRANSFERASE 2); UDP-xylosyltransferase/ transferase/ transferase, transferring glycosyl groups / xyloglucan 6-xylosyltransferasetext mining 25326916(PCA)
AT4G02500(XT2)XT2 (UDP-XYLOSYLTRANSFERASE 2); UDP-xylosyltransferase/ transferase/ transferase, transferring glycosyl groups / xyloglucan 6-xylosyltransferasetext mining 25326916(PCA)
AT4G02500No related data.EC
AT5G07720galactosyl transferase GMA12/MNN10 family proteinEC
AT1G74380No related data.EC

 

Predicted
Functional Partners
annotationTotal
AT4G02500No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

TFFamilyConfidenceDetails
AGL3MADSLAT2G03710
ARR10GARPLAT4G31920
GT-2TrihelixLAT1G76890
RAV1(2)AP2/EREBPHAT1G13260
TGA1bZIPHAT5G65210