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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:ARS27A  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT3G61110ARS27AGSP:2 PPI:30ARS27A (ARABIDOPSIS RIBOSOMAL PROTEIN S27); structural constituent of ribosome.
Related complex
Ribosome, archaea
Ribosome, eukaryotes
Representative Gene Model Description
AT3G61110.1:ARABIDOPSIS RIBOSOMAL PROTEIN S27 (ARS27A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein, zinc-binding (InterPro:IPR011332), Ribosomal protein S27e (InterPro:IPR000592); BEST Arabidopsis thaliana protein match is: 40S ribosomal protein S27 (RPS27A) (TAIR:AT2G45710.1); Has 711 Blast hits to 711 proteins in 279 species: Archae - 93; Bacteria - 0; Metazoa - 298; Fungi - 98; Plants - 99; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink).

Related KEGG pathway    
Genetic Information Processing
   |----------Translation
   |--------------------RibosomeLink to keggView overall Pathway
Database cross-references
TAIR Gene: AT3G61110;
IPI: IPI00539882;
UniParc: UPI00000A3815;
REFSEQ_PROVISIONAL: NP_191670.1;
KEGG: AT3G61110;

GSPannotationmethodsrelated
AT5G56750Ndr family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G56750(NDL1)No related data.text mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT5G4793040S ribosomal protein S27 (RPS27D)
AT5G54940eukaryotic translation initiation factor SUI1, putative
AT5G41700No related data.
AT5G2354026S proteasome regulatory subunit, putative
AT5G21040No related data.
AT5G13710No related data.
AT5G11900eukaryotic translation initiation factor SUI1 family protein
AT4G36940No related data.
AT4G35020No related data.
AT4G30270No related data.
AT4G27650No related data.
AT4G21540No related data.
AT4G16760No related data.
AT4G11420No related data.
AT3G14010No related data.
AT3G12860nucleolar protein Nop56, putative
AT3G12110No related data.
AT3G11710No related data.
AT3G05710No related data.
AT3G05060SAR DNA-binding protein, putative
AT2G41500No related data.
AT2G38740haloacid dehalogenase-like hydrolase family protein
AT2G34850No related data.
AT1G71350eukaryotic translation initiation factor SUI1 family protein
AT1G63700No related data.
AT1G60170No related data.
AT1G07270cell division control protein CDC6b, putative (CDC6b)
AT2G4571040S ribosomal protein S27 (RPS27A)

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
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