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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:PRN  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT3G59220PRNGSP:42 PPI:45PRN (PIRIN); calmodulin binding.
Subcellar localization
nucleus: Pubmed16381842;
Related organ
root      soluble fraction,1-DE      Related article
Representative Gene Model Description
AT3G59220.1:PIRIN (PRN); FUNCTIONS IN: calmodulin binding; INVOLVED IN: response to low fluence blue light stimulus by blue low-fluence system, response to abscisic acid stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, LP.04 four leaves visible, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pirin (InterPro:IPR012093), Pirin, C-terminal (InterPro:IPR008778), Cupin, RmlC-type (InterPro:IPR011051), Pirin, N-terminal (InterPro:IPR003829); BEST Arabidopsis thaliana protein match is: pirin, putative (TAIR:AT2G43120.1); Has 5386 Blast hits to 5384 proteins in 855 species: Archae - 43; Bacteria - 2852; Metazoa - 62; Fungi - 146; Plants - 68; Viruses - 0; Other Eukaryotes - 2215 (source: NCBI BLink).

Predicted Mutant Phenotypes
apical hook    PO:0000012;    hypocotyl  PO:0020100;    chlorenchyma    PO:0005426;    
Database cross-references
TAIR Gene: AT3G59220;
IPI: IPI00545241;
UniParc: UPI00000010D3;
REFSEQ_PROVISIONAL: NP_191481.1;
KEGG: AT3G59220;

GSPannotationmethodsrelated
AT2G26300(GP_ALPHA_1)GP ALPHA 1 (G PROTEIN ALPHA SUBUNIT 1); GTP binding / GTPase/ channel regulator/ signal transducertext mining 12837948(in vitro binding assay|yeast-2-hybrid assay|in vitro reconstitution assay with recombinant protein)
AT1G27530hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G28520(VOZ1)VOZ1 (VASCULAR PLANT ONE ZINC FINGER PROTEIN); transcription activatortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G56050GTP-binding protein-relatedtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G65390(ATPP2-A5)ATPP2-A5 (ARABIDOPSIS THALIANA PHLOEM PROTEIN 2 A5); carbohydrate bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G75860hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT2G21620(RD2)RD2text mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT2G42400(VOZ2)VOZ2 (VASCULAR PLANT ONE ZINC FINGER PROTEIN 2); transcription activatortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G11050(ATFER2)ATFER2 (ferritin 2); binding / ferric iron binding / oxidoreductase/ transition metal ion bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G53990universal stress protein (USP) family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G08230glycine-rich proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G27130eukaryotic translation initiation factor SUI1, putativetext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G13450ATP synthase delta chain, mitochondrial, putative / H(+)-transporting two-sector ATPase, delta (OSCP) subunit, putativetext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G42850hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G48610hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G61820hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G05000tyrosine specific protein phosphatase family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G08820(VAP27-2)VAP27-2 (VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-2); structural moleculetext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G26410hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G13450(ATP5)No related data.text mining 21952135(yeast-2-hybrid)
AT5G42850hypothetical proteintext mining 21952135(yeast-2-hybrid)
AT5G48610hypothetical proteintext mining 21952135(yeast-2-hybrid)
AT1G78300(GRF2)GRF2 (GENERAL REGULATORY FACTOR 2); protein binding / protein phosphorylated amino acid bindingtext mining 19452453(Affinity Capture-MS)
AT4G08230glycine-rich proteintext mining 21952135(yeast-2-hybrid)
AT3G11050(FER2)No related data.text mining 21952135(yeast-2-hybrid)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)
AT3G53990universal stress protein (USP) family proteintext mining 21952135(yeast-2-hybrid)
AT5G61820hypothetical proteintext mining 21952135(yeast-2-hybrid)
AT1G65390(PP2-A5)No related data.text mining 21952135(yeast-2-hybrid)
AT1G08820(VAP27-2)VAP27-2 (VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-2); structural moleculetext mining 21952135(yeast-2-hybrid)
AT1G05000tyrosine specific protein phosphatase family proteintext mining 21952135(yeast-2-hybrid)
AT2G21620(RD2)RD2text mining 21952135(yeast-2-hybrid)
AT4G27130eukaryotic translation initiation factor SUI1, putativetext mining 21952135(yeast-2-hybrid)
AT4G22250zinc finger (C3HC4-type RING finger) family proteintext mining 21798944(yeast-2-hybrid)
AT2G26300(GP ALPHA 1)No related data.text mining 21952135(yeast-2-hybrid)
AT2G42400(VOZ2)VOZ2 (VASCULAR PLANT ONE ZINC FINGER PROTEIN 2); transcription activatortext mining 21952135(yeast-2-hybrid)
AT1G56050GTP-binding protein-relatedtext mining 21952135(yeast-2-hybrid)
AT1G28520(VOZ1)VOZ1 (VASCULAR PLANT ONE ZINC FINGER PROTEIN); transcription activatortext mining 21952135(yeast-2-hybrid)
AT4G26410hypothetical proteintext mining 21952135(yeast-2-hybrid)
AT1G27530hypothetical proteintext mining 21952135(yeast-2-hybrid)
AT1G75860hypothetical proteintext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT2G43120pirin, putative
AT3G59260pirin, putative
AT1G50590pirin, putative

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

TFFamilyConfidenceDetails
ABF1bZIPLAT1G49720
AGL1MADSLAT3G58780
AGL3MADSLAT2G03710
ARR1GARP/ARR-BLAT3G16857
ARR10GARPLAT4G31920
ARR2GARP/ARR-BLAT4G16110
ATHB1HD-ZIPLAT3G01470
RAV1(2)AP2/EREBPHAT1G13260
TGA1bZIPLAT5G65210