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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:SRS6  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT3G54430SRS6GSP:2 PPI:2SRS6 (SHI-RELATED SEQUENCE 6).
Representative Gene Model Description
AT3G54430.1:SHI-RELATED SEQUENCE 6 (SRS6); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: LRP1 (LATERAL ROOT PRIMORDIUM 1); protein homodimerization (TAIR:AT5G12330.2); Has 81 Blast hits to 81 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT3G54430;
IPI: IPI00544080;
UniParc: UPI00000A63D2;
REFSEQ_PROVISIONAL: NP_191011.1;
KEGG: AT3G54430;

GSPannotationmethodsrelated
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)

 


Transcriptional Regulation

Transcription factorTarget geneDetail infoRelated Artical
SEPALLATA3[AT1G24260]AT3G54430No detail info. 19385720

 

TFFamilyConfidenceDetails
AGL1MADSLAT3G58780
RAV1(2)AP2/EREBPLAT1G13260
WRKY18WRKY(Zn)LAT4G31800