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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT3G53190  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT3G53190AT3G53190GSP:17 PPI:17pectate lyase family protein.
Representative Gene Model Description
AT3G53190.1:pectate lyase family protein; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: pectate lyase family protein (TAIR:AT5G04310.1); Has 972 Blast hits to 967 proteins in 165 species: Archae - 0; Bacteria - 422; Metazoa - 0; Fungi - 142; Plants - 397; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT3G53190;
IPI: IPI00541244;
UniParc: UPI000016370A;
REFSEQ_PROVISIONAL: NP_566979.1;
KEGG: AT3G53190;

GSPannotationmethodsrelated
AT5G65210(TGA1)TGA1; DNA binding / calmodulin binding / transcription factortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G37680(HHP4)HHP4 (heptahelical protein 4); receptortext mining 24833385(PCA)
AT4G30850(HHP2)HHP2 (HEPTAHELICAL TRANSMEMBRANE PROTEIN2); receptortext mining 24833385(PCA)
AT1G14020hypothetical proteintext mining 24833385(PCA)
AT5G65210(TGA1)TGA1; DNA binding / calmodulin binding / transcription factortext mining 21952135(yeast-2-hybrid)
AT1G14990hypothetical proteintext mining 24833385(PCA)
AT3G66654peptidyl-prolyl cis-trans isomerase cyclophilin-type family proteintext mining 24833385(PCA)
AT1G16170hypothetical proteintext mining 24833385(PCA)
AT2G30490(C4H)C4H (CINNAMATE-4-HYDROXYLASE); trans-cinnamate 4-monooxygenasetext mining 24833385(PCA)
AT5G06320(NHL3)NHL3text mining 24833385(PCA)
AT5G52420hypothetical proteintext mining 24833385(PCA)
AT1G27440(GUT2)GUT2; catalytic/ glucuronoxylan glucuronosyltransferasetext mining 24833385(PCA)
AT1G29060hypothetical proteintext mining 24833385(PCA)
AT3G28220meprin and TRAF homology domain-containing protein / MATH domain-containing proteintext mining 24833385(PCA)
AT1G47640hypothetical proteintext mining 24833385(PCA)
AT2G40890(CYP98A3)CYP98A3 (cytochrome P450, family 98, subfamily A, polypeptide 3); monooxygenase/ p-coumarate 3-hydroxylasetext mining 24833385(PCA)
AT4G36830(HOS3-1)No related data.text mining 24833385(PCA)

 


Transcriptional Regulation

TFFamilyConfidenceDetails
AGL3MADSHAT2G03710
ARR1GARP/ARR-BLAT3G16857
ARR10GARPLAT4G31920
ARR2GARP/ARR-BLAT4G16110
ATHB1HD-ZIPHAT3G01470
ID1C2H2(Zn)LAT1G25250
RAP2.2AP2/EREBPHAT3G14230
RAV1(2)AP2/EREBPHAT1G13260
TGA1bZIPHAT5G65210