Home Contact Sitemap

AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT3G52960  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT3G52960AT3G52960GSP:5 PPI:60peroxiredoxin type 2, putative.
Subcellar localization
plastid: Pubmed11826309;
Related organ
carpel      urea fraction,1-DE      Related article
carpel      soluble fraction,1-DE      Related article
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
cell suspension culture      triton fraction,Schagger 1-DE      Related article
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
cell suspension culture      SDS fraction,Schagger 1-DE      Related article
cotyledon      SDS fraction,1-DE      Related article
cotyledon      soluble fraction,1-DE      Related article
flower      SDS fraction,1-DE      Related article
flower      soluble fraction,1-DE      Related article
flower bud      SDS fraction,1-DE      Related article
flower bud      soluble fraction,1-DE      Related article
juvenile leaf      SDS fraction,1-DE      Related article
juvenile leaf      soluble fraction,1-DE      Related article
pollen      combined fractions, 1-DE      Related article
pollen      soluble fraction, 1-DE      Related article
pollen      urea fraction, 1-DE      Related article
pollen      cyclohexane fraction, 1-DE      Related article
pollen      urea total extract, 1-DE      Related article
pollen      total extract, ICAT labelling, avidin affinity enriched      Related article
pollen      total extract, ICAT labelling, avidin affinity flow through      Related article
root      soluble fraction,1-DE      Related article
root      SDS fraction,1-DE      Related article
seed      detergent fraction,1-DE      Related article
seed      urea fraction,1-DE      Related article
seed      soluble fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      soluble fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
shoot      Flow through fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Flow through fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchae; IMAC affinity chromatography ng      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
Representative Gene Model Description
AT3G52960.1:peroxiredoxin type 2, putative; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: defense response to bacterium, peptidyl-cysteine S-nitrosylation; LOCATED IN: thylakoid, chloroplast stroma, chloroplast, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: TPX1 (thioredoxin-dependent peroxidase 1); antioxidant/ oxidoreductase (TAIR:AT1G65980.1); Has 3329 Blast hits to 3329 proteins in 622 species: Archae - 43; Bacteria - 1005; Metazoa - 160; Fungi - 217; Plants - 175; Viruses - 0; Other Eukaryotes - 1729 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT3G52960;
IPI: IPI00533612;
UniParc: UPI00000AC168;
REFSEQ_PROVISIONAL: NP_190864.1;
KEGG: AT3G52960;

GSPannotationmethodsrelated
AT5G42980(ATTRX3)ATTRX3 (THIOREDOXIN 3); oxidoreductase, acting on sulfur group of donors, disulfide as acceptortext mining 15352244(enzymatic study)
AT5G43850(ARD4)ARD4; acireductone dioxygenase [iron(II)-requiring]/ metal ion bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G43850(ARD4)ARD4; acireductone dioxygenase [iron(II)-requiring]/ metal ion bindingtext mining 21952135(yeast-2-hybrid)
AT5G03240(UBQ3)UBQ3 (POLYUBIQUITIN 3); protein bindingtext mining 19429840(Affinity Capture-MS)
AT4G29040(RPT2a)RPT2a (regulatory particle AAA-ATPase 2a); ATPasetext mining 24846764(Affinity Capture-MS)

 

Predicted
Functional Partners
annotationTotal
AT3G04780hypothetical protein
AT3G06730thioredoxin family protein
AT3G08710No related data.
AT3G0920060S acidic ribosomal protein P0 (RPP0B)
AT3G1125060S acidic ribosomal protein P0 (RPP0C)
AT3G116302-cys peroxiredoxin, chloroplast (BAS1)
AT3G12580No related data.
AT3G15360No related data.
AT3G16110No related data.
AT3G17880No related data.
AT4G04950thioredoxin family protein
AT4G21710No related data.
AT4G26160No related data.
AT4G27080No related data.
AT4G30890No related data.
AT4G31240hypothetical protein
AT4G31870No related data.
AT4G32960hypothetical protein
AT4G37200No related data.
AT5G06290No related data.
AT5G06690No related data.
AT5G08290No related data.
AT5G16400No related data.
AT5G39950No related data.
AT5G40610glycerol-3-phosphate dehydrogenase (NAD+) / GPDH
AT5G56740No related data.
AT5G60640No related data.
AT1G04980No related data.
AT1G07960No related data.
AT1G08570No related data.
AT1G11530No related data.
AT1G19730No related data.
AT1G21750No related data.
AT1G25260acidic ribosomal protein P0-related
AT1G31170No related data.
AT1G35620No related data.
AT1G43560No related data.
AT1G50320No related data.
AT1G56500haloacid dehalogenase-like hydrolase family protein
AT1G60420DC1 domain-containing protein
AT1G62850translation release factor
AT1G76080No related data.
AT1G76760No related data.
AT1G77510No related data.
AT1G79930No related data.
AT2G01270No related data.
AT2G18390No related data.
AT2G18990No related data.
AT2G23070casein kinase II alpha chain, putative
AT2G27960No related data.
AT2G27970No related data.
AT2G35010No related data.
AT2G41680No related data.
AT2G47470No related data.
AT3G02540No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

TFFamilyConfidenceDetails
AGL1MADSLAT3G58780
RAP2.2AP2/EREBPLAT3G14230
RAV1(2)AP2/EREBPLAT1G13260