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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:ACX4  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT3G51840ACX4GSP:2 PPI:10ACX4 (ACYL-COA OXIDASE 4); acyl-CoA oxidase/ oxidoreductase.
Subcellar localization
peroxisome: Pubmed10212254;
Related organ
carpel      urea fraction,1-DE      Related article
carpel      soluble fraction,1-DE      Related article
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      SDS fraction,1-DE      Related article
cell suspension culture      detergent fraction,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
cell suspension culture      triton fraction,Schagger 1-DE      Related article
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
cell suspension culture      SDS fraction,Schagger 1-DE      Related article
cotyledon      SDS fraction,1-DE      Related article
cotyledon      soluble fraction,1-DE      Related article
flower      SDS fraction,1-DE      Related article
flower      soluble fraction,1-DE      Related article
flower bud      SDS fraction,1-DE      Related article
flower bud      soluble fraction,1-DE      Related article
juvenile leaf      SDS fraction,1-DE      Related article
juvenile leaf      soluble fraction,1-DE      Related article
pollen      combined fractions, 1-DE      Related article
pollen      soluble fraction, 1-DE      Related article
pollen      urea fraction, 1-DE      Related article
pollen      cyclohexane fraction, 1-DE      Related article
pollen      urea total extract, 1-DE      Related article
pollen      total extract, ICAT labelling, avidin affinity flow through      Related article
root      soluble fraction,1-DE      Related article
root      SDS fraction,1-DE      Related article
seed      detergent fraction,1-DE      Related article
seed      urea fraction,1-DE      Related article
seed      soluble fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      soluble fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
Representative Gene Model Description
AT3G51840.1:ACYL-COA OXIDASE 4 (ACX4); FUNCTIONS IN: oxidoreductase activity, acyl-CoA oxidase activity; INVOLVED IN: embryonic development ending in seed dormancy, fatty acid beta-oxidation, short-chain fatty acid metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase, middle and N-terminal (InterPro:IPR009100), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA dehydrogenase/oxidase, central region (InterPro:IPR006091), Acyl-CoA dehydrogenase, conserved site (InterPro:IPR006089), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075), Acyl-CoA dehydrogenase, N-terminal (InterPro:IPR006092); BEST Arabidopsis thaliana protein match is: IVD (ISOVALERYL-COA-DEHYDROGENASE); ATP binding / isovaleryl-CoA dehydrogenase (TAIR:AT3G45300.1); Has 25444 Blast hits to 25413 proteins in 1142 species: Archae - 245; Bacteria - 13843; Metazoa - 1454; Fungi - 515; Plants - 195; Viruses - 0; Other Eukaryotes - 9192 (source: NCBI BLink).

Related KEGG pathway    
Metabolic Pathways
   |----------Lipid Metabolism
   |--------------------Fatty acid metabolismLink to keggView overall Pathway
   |--------------------alpha-Linolenic acid metabolismLink to keggView overall Pathway
   |--------------------Biosynthesis of unsaturated fatty acidsLink to keggView overall Pathway
Related Mutant  
    M2979 Related gene:AT3G51840;
    Method:T-DNA insertion
    Phenotype:General,files
    Related Datasource Link:Riken database
    *

    Database cross-references
    TAIR Gene: AT3G51840;
    IPI: IPI00544713;
    UniParc: UPI0000035E32;
    REFSEQ_PROVISIONAL: NP_190752.1;
    KEGG: AT3G51840;

    GSPannotationmethodsrelated
    AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
    AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)

     

    Predicted
    Functional Partners
    annotationTotal
    AT5G65110No related data.
    AT3G09550protein binding
    AT4G16760No related data.
    AT1G50940No related data.
    AT5G43430No related data.
    AT3G45300No related data.
    AT3G06860No related data.
    AT3G58750No related data.

    O: Ortholog interaction datasets
    G: Shared biological function:Go Ontology
    E: Co-expression
    F: Gene fusion method
    N: Gene neighbors method
    P: Phylogenetic profile method
    D: Enriched domain pair
    What does the displayed number mean when your mouse moved over a certain icon?(LR)


    Transcriptional Regulation

    TFFamilyConfidenceDetails
    AGL3MADSLAT2G03710
    ATHB1HD-ZIPLAT3G01470
    MYB2MYBLAT2G47190
    RAV1(2)AP2/EREBPLAT1G13260
    TGA1bZIPLAT5G65210