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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT3G50030  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT3G50030AT3G50030GSP:2 PPI:3binding.
Related organ
shoot      Flow through fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
Representative Gene Model Description
AT3G50030.1:binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT5G43120.1); Has 844 Blast hits to 815 proteins in 139 species: Archae - 0; Bacteria - 0; Metazoa - 572; Fungi - 109; Plants - 78; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT3G50030;
IPI: IPI00525187;
UniParc: UPI00000A2045;
REFSEQ_PROVISIONAL: NP_190572.1;
KEGG: AT3G50030;

GSPannotationmethodsrelated
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT5G10200binding

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
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