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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:CKA2  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT3G50000CKA2GSP:5 PPI:7CKA2 (CASEIN KINASE II, ALPHA CHAIN 2); kinase.
Subcellar localization
plasma membrane: Pubmed17317660;
Related organ
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
cell suspension culture      SDS fraction,Schagger 1-DE      Related article
flower bud      SDS fraction,1-DE      Related article
seed      detergent fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
Representative Gene Model Description
AT3G50000.1:CASEIN KINASE II, ALPHA CHAIN 2 (CKA2); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, core (InterPro:IPR000719), Serine/threonine protein kinase (InterPro:IPR002290), Serine/threonine protein kinase-related (InterPro:IPR017442), Protein kinase-like (InterPro:IPR011009), Serine/threonine protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: CKA1 (CASEIN KINASE ALPHA 1); kinase (TAIR:AT5G67380.1); Has 64670 Blast hits to 63945 proteins in 1579 species: Archae - 29; Bacteria - 5349; Metazoa - 28246; Fungi - 7540; Plants - 8884; Viruses - 282; Other Eukaryotes - 14340 (source: NCBI BLink).

Related KEGG pathway    
Cellular Processes
   |----------Behavior
   |--------------------Circadian rhythmLink to keggView overall Pathway
Database cross-references
TAIR Gene: AT3G50000;
IPI: IPI00518626;
UniParc: UPI00000ADB0B;
REFSEQ_PROVISIONAL: NP_190569.2;
KEGG: AT3G50000;

GSPannotationmethodsrelated
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G03773hypothetical proteintext mining 21735091(PCA)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)
AT1G78300(GRF2)GRF2 (GENERAL REGULATORY FACTOR 2); protein binding / protein phosphorylated amino acid bindingtext mining 19452453(Affinity Capture-MS)
AT5G03240(UBQ3)UBQ3 (POLYUBIQUITIN 3); protein bindingtext mining 23667124(Affinity Capture-MS)

 

Predicted
Functional Partners
annotationTotal
AT5G67380No related data.
AT2G23080casein kinase II alpha chain, putative

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
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