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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:ALDH2B4  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT3G48000ALDH2B4GSP:4 PPI:42ALDH2B4 (ALDEHYDE DEHYDROGENASE 2B4); 3-chloroallyl aldehyde dehydrogenase/ ATP binding / aldehyde dehydrogenase (NAD).
Subcellar localization
mitochondrion: Pubmed12444417; plastid: Pubmed15028209;
Related organ
carpel      soluble fraction,1-DE      Related article
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      SDS fraction,1-DE      Related article
cell suspension culture      detergent fraction,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
cell suspension culture      triton fraction,Schagger 1-DE      Related article
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
cell suspension culture      SDS fraction,Schagger 1-DE      Related article
cotyledon      SDS fraction,1-DE      Related article
cotyledon      soluble fraction,1-DE      Related article
flower      SDS fraction,1-DE      Related article
flower      soluble fraction,1-DE      Related article
flower bud      SDS fraction,1-DE      Related article
flower bud      soluble fraction,1-DE      Related article
juvenile leaf      SDS fraction,1-DE      Related article
juvenile leaf      soluble fraction,1-DE      Related article
root      soluble fraction,1-DE      Related article
root      SDS fraction,1-DE      Related article
seed      detergent fraction,1-DE      Related article
seed      urea fraction,1-DE      Related article
seed      soluble fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      soluble fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
shoot      Phosphopeptide enriched fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Phosphopeptide enriched fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Flow through fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchae; IMAC affinity chromatography ng      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
Representative Gene Model Description
AT3G48000.1:ALDEHYDE DEHYDROGENASE 2B4 (ALDH2B4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: ALDH2B7; 3-chloroallyl aldehyde dehydrogenase/ aldehyde dehydrogenase (NAD) (TAIR:AT1G23800.1); Has 43552 Blast hits to 43259 proteins in 1793 species: Archae - 242; Bacteria - 19685; Metazoa - 2302; Fungi - 1320; Plants - 606; Viruses - 0; Other Eukaryotes - 19397 (source: NCBI BLink).

Related KEGG pathway    
Metabolic Pathways
   |----------Carbohydrate Metabolism
   |--------------------Glycolysis / GluconeogenesisLink to keggView overall Pathway
   |--------------------Butanoate metabolismLink to keggView overall Pathway
   |--------------------Pyruvate metabolismLink to keggView overall Pathway
   |--------------------Propanoate metabolismLink to keggView overall Pathway
   |----------Lipid Metabolism
   |--------------------Fatty acid metabolismLink to keggView overall Pathway
   |--------------------Glycerolipid metabolismLink to keggView overall Pathway
   |----------Amino Acid Metabolism
   |--------------------Valine, leucine and isoleucine degradationLink to keggView overall Pathway
   |--------------------Lysine degradationLink to keggView overall Pathway
   |--------------------Arginine and proline metabolismLink to keggView overall Pathway
   |--------------------Histidine metabolismLink to keggView overall Pathway
   |--------------------Tryptophan metabolismLink to keggView overall Pathway
   |----------Metabolism of Other Amino Acids
   |--------------------beta-Alanine metabolismLink to keggView overall Pathway
   |----------Xenobiotics Biodegradation and Metabolism
   |--------------------3-Chloroacrylic acid degradationLink to keggView overall Pathway
   |----------Biosynthesis of Secondary Metabolites
   |--------------------Limonene and pinene degradationLink to keggView overall Pathway
Database cross-references
TAIR Gene: AT3G48000;
IPI: IPI00548267;
UniParc: UPI00000AC4D9;
REFSEQ_PROVISIONAL: NP_190383.1;
KEGG: AT3G48000;

GSPannotationmethodsrelated
AT5G65210(TGA1)TGA1; DNA binding / calmodulin binding / transcription factortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G65210(TGA1)TGA1; DNA binding / calmodulin binding / transcription factortext mining 21952135(yeast-2-hybrid)
AT5G03240(UBQ3)UBQ3 (POLYUBIQUITIN 3); protein bindingtext mining 23667124(Affinity Capture-MS)
AT1G23800(ALDH2B7)ALDH2B7; 3-chloroallyl aldehyde dehydrogenase/ aldehyde dehydrogenase (NAD)EC

 

Predicted
Functional Partners
annotationTotal
AT1G23800No related data.
AT1G79440No related data.
AT1G19880regulator of chromosome condensation (RCC1) family protein
AT3G24503No related data.
AT3G66658No related data.
AT3G48170No related data.
AT3G52730ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein
AT3G53570No related data.
AT4G1317060S ribosomal protein L13A (RPL13aC)
AT4G26840No related data.
AT5G0709040S ribosomal protein S4 (RPS4B)
AT5G12250No related data.
AT5G18170No related data.
AT5G22060No related data.
AT5G36880acetyl-CoA synthetase, putative / acetate-CoA ligase, putative
AT5G40760No related data.
AT5G55760No related data.
AT5G5842040S ribosomal protein S4 (RPS4D)
AT1G05350thiF family protein
AT1G11680No related data.
AT1G14980No related data.
AT1G29900No related data.
AT1G53240malate dehydrogenase (NAD), mitochondrial
AT1G59900No related data.
AT1G62850translation release factor
AT1G72560No related data.
AT1G7405060S ribosomal protein L6 (RPL6C)
AT1G75560zinc knuckle (CCHC-type) family protein
AT2G16960importin beta-2 subunit family protein
AT2G25140No related data.
AT2G36530No related data.
AT2G39770No related data.
AT3G08980signal peptidase I family protein
AT3G23990No related data.
AT2G24270No related data.
AT1G74920No related data.
AT1G54100No related data.
AT2G14170No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

TFFamilyConfidenceDetails
AGL15MADSLAT5G13790
ARR10GARPLAT4G31920
GT-3bTrihelixLAT5G01380
ID1C2H2(Zn)LAT1G25250
RAV1(2)AP2/EREBPLAT1G13260
TGA1bZIPHAT5G65210